RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 MAOAP21397 527 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 CERS1P27544 350 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SOWAHCQ53LP3 525 aaPredicted RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 RNASE10Q5GAN6 216 aaKnown RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 XAF1Q6GPH4 301 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 KIAA1211LQ6NV74 962 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 NUDT8Q8WV74 236 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 NEDD4LQ96PU5 975 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 VEGFDO43915 354 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 NUDT1P36639 197 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SNRPGP62308 76 aaKnown RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 ASPGQ86U10 573 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 HCAR2Q8TDS4 363 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 GFRA2O00451 464 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 IL1RNP18510 177 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SLC1A3P43003 542 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SULT1C2O00338 296 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 RGRP47804 291 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 SGSHP51688 502 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 LRIF1Q5T3J3 769 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 ELP5Q8TE02 316 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 ASB11Q8WXH4 323 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 ZMYND19Q96E35 227 aaPredicted RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 PLCXD1Q9NUJ7 323 aa13.15□□□□□ -0.3
SMC5-201ENST00000361138 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 TPT1P13693 172 aaKnown RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 ACTR1BP42025 376 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 GIPRP48546 466 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TPMTP51580 245 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 NRG3P56975 720 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 ACTR1AP61163 376 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TLE2Q04725 743 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 LKAAEAR1Q8TD35 194 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 ZNF208O43345 1280 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SGCEO43556 437 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 FRS3O43559 492 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 AK1P00568 194 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 PAQR8Q8TEZ7 354 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TCEAL7Q9BRU2 100 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SRCP12931 536 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 GP1BBP13224 206 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 MTHFD2P13995 350 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 HOXC13P31276 330 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SLC6A9P48067 706 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 MPP7Q5T2T1 576 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 RAD9AQ99638 391 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 DHRS9Q9BPW9 319 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SLCO3A1Q9UIG8 710 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 GPX5O75715 221 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 AHRP35869 848 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SUOXP51687 545 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SPIN3Q5JUX0 258 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SFXN4Q6P4A7 337 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 ZNF649Q9BS31 505 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TRDV1A0A1B0GX56 115 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 H7C417 338 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 RAB3DO95716 219 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
SMC5-201ENST00000361138 HRGP04196 525 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SORDQ00796 357 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SBSNQ6UWP8 590 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 OR6V1Q8N148 313 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 C20orf85Q9H1P6 137 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 V9GY05 133 aa13.14□□□□□ -0.31
SMC5-201ENST00000361138 A8MUA0 341 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CSTAP01040 98 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 DCNP07585 359 aaKnown RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 AMY2BP19961 511 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ELAVL4P26378 380 aaKnown RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 CAMLGP49069 296 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 MARCH8Q5T0T0 291 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 LRRC56Q8IYG6 542 aaPredicted RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 ZNF454Q8N9F8 522 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CYB561A3Q8NBI2 242 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ANGPTL6Q8NI99 470 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms