RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 AGBL4Q5VU57 503 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 TECPR1Q7Z6L1 1165 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 TMEM17Q86X19 198 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CLIP4Q8N3C7 705 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 OR51G2Q8NGK0 314 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 OR9A2Q8NGT5 310 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 OR14L1PQ8NHC6 308 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ACOT11Q8WXI4 607 aaPredicted RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 FGF11Q92914 225 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 EGLN2Q96KS0 407 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 LRR1Q96L50 414 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SECISBP2Q96T21 854 aaKnown RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 DUSP15Q9H1R2 295 aaPredicted RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 RNF121Q9H920 327 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ZBTB20Q9HC78 741 aaPredicted RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 PPIL1Q9Y3C6 166 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 NAALAD2Q9Y3Q0 740 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 A0A1B0GVI7 797 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CLCA1A8K7I4 914 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 TAPBPO15533 448 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SCO2O43819 266 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CCNKO75909 580 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ADORA3P0DMS8 318 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ELK4P28324 431 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 HTR3AP46098 478 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 BHLHA9Q7RTU4 235 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 HS3ST5Q8IZT8 346 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CCL4L1Q8NHW4 92 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 THOC3Q96J01 351 aaKnown RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 MROQ9BYG7 248 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 MED28Q9H204 178 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 IFT46Q9NQC8 304 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CUEDC1Q9NWM3 386 aaPredicted RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 GNG8Q9UK08 70 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 EDARQ9UNE0 448 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 C17orf105B2RV13 164 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SGK494L7N484 410 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 FBP2O00757 339 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 DLGAP1O14490 977 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 XPNPEP2O43895 674 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 PRKYO43930 277 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CDRT1O95170 752 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 FURINP09958 794 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 UGT2B7P16662 529 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SLC5A2P31639 672 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 XCR1P46094 333 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 MTNR1AP48039 350 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 PDX1P52945 283 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 HBA1P69905 142 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 TNFRSF17Q02223 184 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 DMPKQ09013 629 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SF3B4Q15427 424 aaKnown RBP eCLIP6.59□□□□□ -1.352e-6■■■■□ 26.1
RAB5B-201ENST00000360299 SEC23BQ15437 767 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 VWA2Q5GFL6 755 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 TMEM207Q6UWW9 146 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 CD300LGQ6UXG3 332 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 C19orf47Q8N9M1 422 aaKnown RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ADAMTS16Q8TE57 1224 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 ACOT12Q8WYK0 555 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 HTRA1Q92743 480 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 C1QTNF2Q9BXJ5 285 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SEMA6CQ9H3T2 930 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 NMNAT1Q9HAN9 279 aaPredicted RBP6.59□□□□□ -1.35
RAB5B-201ENST00000360299 SERGEFQ9UGK8 458 aa6.59□□□□□ -1.35
RAB5B-201ENST00000360299 FMO6PO60774 539 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SLC19A2O60779 497 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SNAPC5O75971 98 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 PEX11BO96011 259 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 MT-ND2P03891 347 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 ITGAMP11215 1152 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 RPS3AP61247 264 aaKnown RBP6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SLC3A1Q07837 685 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 RIPPLY1Q0D2K3 151 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 RAB39AQ14964 217 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 PTPRRQ15256 657 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SLC5A12Q1EHB4 618 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 YOD1Q5VVQ6 348 aaPredicted RBP6.58□□□□□ -1.36
RAB5B-201ENST00000360299 PRAMEF8Q5VWM4 474 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 PRAMEF7Q5VXH5 474 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 ZNF227Q86WZ6 799 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 CNIH3Q8TBE1 160 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 CREB3L4Q8TEY5 395 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 CCDC107Q8WV48 283 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 ASB12Q8WXK4 309 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 TFAP2CQ92754 450 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 ISOC1Q96CN7 298 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 COQ8BQ96D53 544 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SLC30A2Q9BRI3 323 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 TTYH2Q9BSA4 534 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 LRRC61Q9BV99 259 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 CD93Q9NPY3 652 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 POLE3Q9NRF9 147 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 MMACHCQ9Y4U1 282 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 ATG2BQ96BY7 2078 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 SPTY2D1-AS1A0A0U1RR47 76 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 CIB4A0PJX0 185 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 TLCD2A6NGC4 264 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 NPIPA2E9PIF3 369 aa6.58□□□□□ -1.36
RAB5B-201ENST00000360299 LMO7DNF2Z398 122 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms