RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 IER3IP1Q9Y5U9 82 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 A0A0U1RQS6 177 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 A0A1W2PQU0 124 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 VEGFDO43915 354 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 FDXRP22570 491 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 SEC61A1P61619 476 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 IL13RA1P78552 427 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 STEAP2Q8NFT2 490 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF778Q96MU6 729 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 CDH20Q9HBT6 801 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 TRAPPC13A5PLN9 417 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 HOXB5P09067 269 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 DRD2P14416 443 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 SERPINA2P20848 420 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 MPP7Q5T2T1 576 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 PRAMEF8Q5VWM4 474 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 PRAMEF7Q5VXH5 474 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF808Q8N4W9 903 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 CCNL2Q96S94 520 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 SORBS1Q9BX66 1292 aaKnown RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF436Q9C0F3 470 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 RPP30P78346 268 aaKnown RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 KANSL1Q7Z3B3 1105 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ACTL7AQ9Y615 435 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 MYH10P35580 1976 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 C2orf72A6NCS6 295 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 CSF1P09603 554 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF888P0CJ79 500 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 SF3A2Q15428 464 aaKnown RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 MRPL21Q7Z2W9 205 aaKnown RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 BPHLQ86WA6 291 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF440Q8IYI8 595 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 APCDD1Q8J025 514 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 TERB2Q8NHR7 220 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 FBXO27Q8NI29 283 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 GTF2H4Q92759 462 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 CRHBPP24387 322 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 HTR6P50406 440 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ARSDP51689 593 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 GPR17Q13304 367 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 PEA15Q15121 130 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 NPY5RQ15761 445 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 HEPHL1Q6MZM0 1159 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 CHFRQ96EP1 664 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 C4orf36Q96KX1 117 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ENPP5Q9UJA9 477 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 VDAC3Q9Y277 283 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 BCL9LQ86UU0 1499 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF780AO75290 641 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-203ENST00000359759 KCNE1P15382 129 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 PROZP22891 400 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF783Q6ZMS7 281 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 TMEM130Q8N3G9 435 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 C1orf74Q96LT6 269 aa15.15■□□□□ 0.02
COL18A1-203ENST00000359759 APLNRP35414 380 aa15.14■□□□□ 0.02
COL18A1-203ENST00000359759 HOXD12P35452 270 aa15.14■□□□□ 0.02
COL18A1-203ENST00000359759 LTC4SQ16873 150 aa15.14■□□□□ 0.02
COL18A1-203ENST00000359759 KIAA0319Q5VV43 1072 aa15.14■□□□□ 0.02
COL18A1-203ENST00000359759 CDCA2Q69YH5 1023 aaPredicted RBP15.14■□□□□ 0.02
COL18A1-203ENST00000359759 C3orf49Q96BT1 292 aa15.14■□□□□ 0.02
COL18A1-203ENST00000359759 MTHFD2LQ9H903 347 aaPredicted RBP15.14■□□□□ 0.02
COL18A1-203ENST00000359759 MYH8P13535 1937 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 FBXO24O75426 580 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 F3P13726 295 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 RPL23AP62750 156 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF33AQ06730 810 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 PAGE3Q5JUK9 113 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF610Q8N9Z0 462 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 BCL7BQ9BQE9 202 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 MVB12BQ9H7P6 319 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 INTS6Q9UL03 887 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 CBR1P16152 277 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 XCR1P46094 333 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 OR7A5Q15622 319 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 PAN3Q58A45 887 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 DNAJC5GQ8N7S2 189 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 TAAR8Q969N4 342 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 ZBTB8AQ96BR9 441 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 LRRC46Q96FV0 321 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 TRMT2BQ96GJ1 504 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 NOX3Q9HBY0 568 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 HOXD13P35453 343 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 MC3RP41968 323 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 TAS2R31P59538 309 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 HOXC5Q00444 222 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 MS4A2Q01362 244 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 RELAQ04206 551 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 SLC14A1Q13336 389 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 GALEQ14376 348 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 STEAP4Q687X5 459 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 COMMD6Q7Z4G1 85 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 OR4K15Q8NH41 348 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 CA14Q9ULX7 337 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 A0A1W2PPV4 95 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 A0A1W2PS29 197 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 CEBPZOSA8MTT3 80 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 KIAA0895LQ68EN5 471 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms