RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RGS11O94810 467 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 HPXP02790 462 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 GIPP09681 153 aaPredicted RBP13.96□□□□□ -0.17
UBAP1-202ENST00000359544 TNFAIP8L2Q6P589 184 aaPredicted RBP13.96□□□□□ -0.17
UBAP1-202ENST00000359544 AGTRAPQ6RW13 159 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 SPICQ8N5J4 248 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 FAM71CQ8NEG0 241 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 MRPS31Q92665 395 aaKnown RBP13.96□□□□□ -0.17
UBAP1-202ENST00000359544 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 TM6SF2Q9BZW4 377 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 EGLN3Q9H6Z9 239 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
UBAP1-202ENST00000359544 PRR23D1E9PI22 279 aaPredicted RBP13.96□□□□□ -0.18
UBAP1-202ENST00000359544 SOCS5O75159 536 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 MT-ND4P03905 459 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 PRR23D2P0DMB1 279 aaPredicted RBP13.96□□□□□ -0.18
UBAP1-202ENST00000359544 IFNGR2P38484 337 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 MAPK8P45983 427 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 MAPK9P45984 424 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 RECQLP46063 649 aaPredicted RBP13.96□□□□□ -0.18
UBAP1-202ENST00000359544 TAS2R50P59544 299 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 CNTN1Q12860 1018 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 FAM69AQ5T7M9 428 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 OR6K2Q8NGY2 324 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 GNPDA2Q8TDQ7 276 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.18
UBAP1-202ENST00000359544 ZNF649Q9BS31 505 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 IFT27Q9BW83 186 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 CXorf36Q9H7Y0 433 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 MIEF1Q9NQG6 463 aa13.96□□□□□ -0.18
UBAP1-202ENST00000359544 A0A1B0GW55 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DNASE2O00115 360 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 GBAP04062 536 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L2P0CJ85 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L3P0CJ86 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L4P0CJ87 422 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L5P0CJ88 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L6P0CJ89 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4L7P0CJ90 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 ATP6V1E1P36543 226 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 RAP2BP61225 183 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DGCR2P98153 550 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 TRAM1Q15629 374 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 PDZD9Q8IXQ8 264 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 STPG2Q8N412 459 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 MORN4Q8NDC4 146 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 GPA33Q99795 319 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 CHIAQ9BZP6 476 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 SMG9Q9H0W8 520 aaKnown RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 FN3KQ9H479 309 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 WDR26Q9H7D7 661 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 NLGN3Q9NZ94 848 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 STOX2Q9P2F5 926 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 MGAT4CQ9UBM8 478 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DUX4Q9UBX2 424 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 CCDC88CQ9P219 2028 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 A0A1B0GUH1 482 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 TRABD2BA6NFA1 517 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 SLC9B1P1A6NJY1 282 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 MPTX1A8MV57 137 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 ANHXE9PGG2 379 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 GSTZ1O43708 216 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 CORO1AP31146 461 aaKnown RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 MAZP56270 477 aaKnown RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 KLF9Q13886 244 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 GNA13Q14344 377 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 GRM7Q14831 915 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 CTXN3Q4LDR2 81 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 ASIC4Q96FT7 647 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 BEX1Q9HBH7 125 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 NPDC1Q9NQX5 325 aaPredicted RBP13.95□□□□□ -0.18
UBAP1-202ENST00000359544 CPNE7Q9UBL6 633 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 VWA8A3KMH1 1905 aa13.95□□□□□ -0.18
UBAP1-202ENST00000359544 TCF20Q9UGU0 1960 aaKnown RBP13.94□□□□□ -0.18
UBAP1-202ENST00000359544 MCRIP1C9JLW8 97 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 PGRMC2O15173 223 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 SELENOFO60613 162 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 PLATP00750 562 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 ADRB1P08588 477 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 ACP5P13686 325 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 IL9P15248 144 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 CD53P19397 219 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 SHC1P29353 583 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 HTR1FP30939 366 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 S100A11P31949 105 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 RPS26P62854 115 aaKnown RBP13.94□□□□□ -0.18
UBAP1-202ENST00000359544 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
UBAP1-202ENST00000359544 AADACL4Q5VUY2 407 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 KIAA1161Q6NSJ0 714 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 C17orf107Q6ZR85 190 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 FAM83HQ6ZRV2 1179 aaPredicted RBP13.94□□□□□ -0.18
UBAP1-202ENST00000359544 SLC9B2Q86UD5 537 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 TSPAN33Q86UF1 283 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
UBAP1-202ENST00000359544 ASZ1Q8WWH4 475 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms