RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SHISA5Q8N114 240 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 SLC34A3Q8N130 599 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 AMER2Q8N7J2 671 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 PROKR2Q8NFJ6 384 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 MCFD2Q8NI22 146 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 DOK4Q8TEW6 326 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 OPALINQ96PE5 141 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 MAP3K3Q99759 626 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 ALOXE3Q9BYJ1 711 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 MED17Q9NVC6 651 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 PLCL2Q9UPR0 1127 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 CDH10Q9Y6N8 788 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 TLCD2A6NGC4 264 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 METTL15A6NJ78 407 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 STK25O00506 426 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ARHGAP33O14559 1287 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MYL12BO14950 172 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 AQP9O43315 295 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 FOXS1O43638 330 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 CTNSO60931 367 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 TGFBR1P36897 503 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 GABRA4P48169 554 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 STARD6P59095 220 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 RAB40BQ12829 278 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 TMED1Q13445 227 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ZNF404Q494X3 552 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MINDY4Q4G0A6 757 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 C3orf38Q5JPI3 329 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 FIGNL1Q6PIW4 674 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MFSD4AQ8N468 514 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 DEFB119Q8N690 84 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 NANOGP1Q8N7R0 232 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 OR52I1Q8NGK6 324 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 TMEM255BQ8WV15 326 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 SHDQ96IW2 340 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 OR51E2Q9H255 320 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MMP27Q9H306 513 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 FOLH1BQ9HBA9 442 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 IL20Q9NYY1 176 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 HCN3Q9P1Z3 774 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 EPHA6Q9UF33 1036 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 THADAQ6YHU6 1953 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 LOC100506127A0A0U1RQW1 187 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 GXYLT2A0PJZ3 443 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 LMO7DNF2Z398 122 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 PEX12O00623 359 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 HRO43593 1189 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 PIP5K1CO60331 668 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 KCNK2O95069 426 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MED26O95402 600 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 GNSP15586 552 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 HTR2AP28223 471 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 GPR4P46093 362 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 EPHA4P54764 986 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 NXPH1P58417 271 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 HNRNPKP61978 463 aaKnown RBP eCLIP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 STX4Q12846 297 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MLLT11Q13015 90 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 SLC13A2Q13183 592 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 COL9A2Q14055 689 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 SPHARQ15513 63 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 SSX1Q16384 188 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 PGGHGQ32M88 737 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 TCTE1Q5JU00 501 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 DGAT2L6Q6ZPD8 337 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 BCDIN3DQ7Z5W3 292 aaKnown RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MEX3DQ86XN8 651 aaKnown RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 B4GALNT2Q8NHY0 566 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ZNF578Q96N58 590 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 CD180Q99467 661 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 PRSS27Q9BQR3 290 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 CHCHD6Q9BRQ6 235 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 RBCK1Q9BYM8 510 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 RAB33BQ9H082 229 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 FGF20Q9NP95 211 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-202ENST00000359031 PRTFDC1Q9NRG1 225 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 TBCCD1Q9NVR7 557 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 KCNE5Q9UJ90 142 aa13.82□□□□□ -0.2
GABPB1-202ENST00000359031 MYO15AQ9UKN7 3530 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 TTC36A6NLP5 189 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 CLDN4O14493 209 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 ZNF749O43361 778 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 NTN1O95631 604 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 BMP4P12644 408 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 MYL12AP19105 171 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 S1PR1P21453 382 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 RPL6Q02878 288 aaKnown RBP13.81□□□□□ -0.2
GABPB1-202ENST00000359031 OR1Q1Q15612 314 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 ZSWIM7Q19AV6 140 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 FLYWCH1Q4VC44 716 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 C14orf28Q4W4Y0 310 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 ZNF613Q6PF04 617 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 OGFOD3Q6PK18 319 aa13.81□□□□□ -0.2
GABPB1-202ENST00000359031 GDPGP1Q6ZNW5 385 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms