RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PSPHP78330 225 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM81Q6P7N7 255 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 APOOLQ6UXV4 268 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC29A4Q7RTT9 530 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TAS1R3Q7RTX0 852 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NRMQ8IXM6 262 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HERVK_113Q902F9 699 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NT5C3BQ969T7 300 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FUBP1Q96AE4 644 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ISYNA1Q9NPH2 558 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 EVLQ9UI08 416 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 DUOX1Q9NRD9 1551 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SPATA31A5Q5VU36 1347 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SPATA31A7Q8IWB4 1347 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TRIM77I1YAP6 450 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC33A1O00400 549 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CYTIPO60759 359 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FOXA1P55317 472 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CDK3Q00526 305 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GHRHRQ02643 423 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR10Z1Q8NGY1 313 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR51A7Q8NH64 312 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MRI1Q9BV20 369 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 DUXAA6NLW8 204 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZBTB7AO95365 584 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GIPRP48546 466 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TAS2R19P59542 299 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 YIF1BQ5BJH7 314 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 DCST2Q5T1A1 773 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 AGTRAPQ6RW13 159 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR2AP1Q8NGE2 309 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HAVCR2Q8TDQ0 301 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 AMBRA1Q9C0C7 1298 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GPR89AB7ZAQ6 455 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GPR89BP0CG08 455 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MEF2DQ14814 521 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC10A6Q3KNW5 377 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PRAMEF14Q5SWL7 426 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 IL20RBQ6UXL0 311 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ANKK1Q8NFD2 765 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MYLIPQ8WY64 445 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HRASLS5Q96KN8 279 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 WDR83Q9BRX9 315 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SNRPBP14678 240 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CSF2RBP32927 897 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SNTB1Q13884 538 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PCBP2Q15366 365 aaKnown RBP eCLIP5.75□□□□□ -1.493e-7■■■■□ 25.6
VPS13B-203ENST00000358544 MINDY4Q4G0A6 757 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SERPINA11Q86U17 422 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FAM212BQ9NTI7 297 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 KIAA1522Q9P206 1035 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 POMT2Q9UKY4 750 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR2F2O95006 317 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CBX7O95931 251 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CLCNKBP51801 687 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OR2F1Q13607 317 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GPAT4Q86UL3 456 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GLYATL1Q969I3 302 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CD244Q9BZW8 370 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TSPAN10Q9H1Z9 355 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A14Q9Y267 594 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 A0A1W2PQ67 120 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 I6L893 689 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ETFAP13804 333 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 AKR1C2P52895 323 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 DGCR2P98153 550 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OC90Q02509 493 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 AKR1C1Q04828 323 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC5A12Q1EHB4 618 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RPS26P11Q5JNZ5 115 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 KDM4DQ6B0I6 523 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 C15orf39Q6ZRI6 1047 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM145Q8NBT3 493 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC25A46Q96AG3 418 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ANKRD31Q8N7Z5 1873 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF587BE7ETH6 402 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ALDH2P05091 517 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 HCKP08631 526 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CHST9Q7L1S5 443 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 LIPT1Q9Y234 373 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CBLL1Q75N03 491 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF101Q8IZC7 436 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RAB3CQ96E17 227 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 IL20Q9NYY1 176 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 FBXL2Q9UKC9 423 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CCDC85CA6NKD9 419 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 UPK3BL1B0FP48 263 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 UPK3BL2E5RIL1 263 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GPR171O14626 319 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CASC3O15234 703 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF208O43345 1280 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ERCC1P07992 297 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 NR2C1P13056 603 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 IGFALSP35858 605 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OR56A3Q8NH54 315 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ASB13Q8WXK3 278 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CNTNAP3Q9BZ76 1288 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OPA3Q9H6K4 179 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF98A6NK75 572 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms