RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 B3GNT7Q8NFL0 401 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 OR1F2PQ96R84 312 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 LOC105369274A0A096LPK9 316 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 A6NIZ1 184 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 CRTAPO75718 401 aaPredicted RBP12.16□□□□□ -0.46
SMC4-202ENST00000357388 SERPINA5P05154 406 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 FDXRP22570 491 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RAP1BP61224 184 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RAP1AP62834 184 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 OR4N4Q8N0Y3 316 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 KDM1BQ8NB78 822 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TBC1D20Q96BZ9 403 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 NPY6RQ99463 290 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 GJE1A6NN92 205 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 NME4O00746 187 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 PDGFAP04085 211 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 LPLP06858 475 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TRAPPC2P0DI81 140 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TRAPPC2BP0DI82 140 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
SMC4-202ENST00000357388 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
SMC4-202ENST00000357388 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TNFRSF10AO00220 468 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 GBAP04062 536 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SLC35E2BP0CK96 405 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TMEM225BP0DP42 221 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 CBLP22681 906 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 CHRNB4P30926 498 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 DLX2Q07687 328 aaPredicted RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 UPP1Q16831 310 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 NKPD1Q17RQ9 610 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 GPR137CQ8N3F9 429 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SLC30A7Q8NEW0 376 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 PPP1R35Q8TAP8 253 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ACOT11Q8WXI4 607 aaPredicted RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 ZNF516Q92618 1163 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ECHDC3Q96DC8 303 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 IGSF21Q96ID5 467 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TXNDC15Q96J42 360 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 PITX2Q99697 317 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 AGPAT4Q9NRZ5 378 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TGOLN2O43493 480 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SLC43A1O75387 559 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 GPR4P46093 362 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TAS2R38P59533 333 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 OGDHQ02218 1023 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SULF2Q8IWU5 870 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 OR9A4Q8NGU2 314 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SLC2A12Q8TD20 617 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 FAM46AQ96IP4 442 aaKnown RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 ZNF286AQ9HBT8 521 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 BTNL2Q9UIR0 455 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 FAM227AF5H4B4 570 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ICMTO60725 284 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ETV4P43268 484 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SELENOWP63302 87 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 BCL7AQ4VC05 210 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TMEM200AQ86VY9 491 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SPTSSAQ969W0 71 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ZNF75AQ96N20 296 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 LMF1Q96S06 567 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 SPHK2Q9NRA0 654 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 B3GNT2Q9NY97 397 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 TESQ9UGI8 421 aaKnown RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 DPM1O60762 260 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 RNGTTO60942 597 aaKnown RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 ASGR2P07307 311 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
SMC4-202ENST00000357388 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 GPR50Q13585 617 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 MANEALQ5VSG8 457 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 CPZQ66K79 652 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 IL17RDQ8NFM7 739 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 ADAM19Q9H013 955 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 PRDM9Q9NQV7 894 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 FTSJ1Q9UET6 329 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 V9GY05 133 aa12.15□□□□□ -0.46
SMC4-202ENST00000357388 CAPNS1P04632 268 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 MMP2P08253 660 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 JUNDP17535 347 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 ACRV1P26436 265 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 GIFP27352 417 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 TNFSF8P32971 234 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 TAS2R46P59540 309 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 SCAPQ12770 1279 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
SMC4-202ENST00000357388 CCNJQ5T5M9 372 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
SMC4-202ENST00000357388 IL17RCQ8NAC3 791 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms