RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CCDC71LQ8N9Z2 235 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 ALOXE3Q9BYJ1 711 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SLA2Q9H6Q3 261 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 FUOMA2VDF0 154 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF43P17038 809 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 MC3RP41968 323 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 CDK3Q00526 305 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 DSC1Q08554 894 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 ATXN7L3Q14CW9 347 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 RTL6Q6ICC9 239 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 FAM198BQ6UWH4 519 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 RNF113BQ8IZP6 322 aaKnown RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 OR5W2Q8NH69 310 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 NRG4Q8WWG1 115 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SPIN2AQ99865 258 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SPIN2BQ9BPZ2 258 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 BTBD2Q9BX70 525 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 POLE4Q9NR33 117 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 THSD1Q9NS62 852 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 HS3ST2Q9Y278 367 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 EFCAB7A8K855 629 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 GPRIN2O60269 458 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 C1orf105O95561 183 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 HIST1H1TP22492 207 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 CRHBPP24387 322 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 NNATQ16517 81 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 METAP1DQ6UB28 335 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 KIF18BQ86Y91 864 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 METTL4Q8N3J2 472 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SNAPC3Q92966 411 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 UTP4Q969X6 686 aaKnown RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
COL9A1-202ENST00000357250 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 LHX3Q9UBR4 397 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 SLC7A7Q9UM01 511 aa11.07□□□□□ -0.64
COL9A1-202ENST00000357250 M0R3H8 397 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 FUT1P19526 365 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 CERS1P27544 350 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 GLO1Q04760 184 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 C6orf183Q5T699 404 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM244Q5VVB8 128 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF480Q8WV37 535 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TM9SF4Q92544 642 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TSNAXQ99598 290 aaKnown RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 EPHX3Q9H6B9 360 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ZBTB20Q9HC78 741 aaPredicted RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 IL37Q9NZH6 218 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ABRACLQ9P1F3 81 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 SLC22A7Q9Y694 548 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 CD34P28906 385 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 OPRL1P41146 370 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 FAM189BP81408 668 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 RIN1Q13671 783 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 IER5LQ5T953 404 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 KIAA0895LQ68EN5 471 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 PARS2Q7L3T8 475 aaKnown RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 B3GNT7Q8NFL0 401 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM163Q8TC26 289 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 DIO2Q92813 273 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 FN3KQ9H479 309 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 SACM1LQ9NTJ5 587 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TESQ9UGI8 421 aaKnown RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 PCDHGA8Q9Y5G5 932 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 TCRBV5S1A1TA0A578 114 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF850A8MQ14 1090 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ATE1O95260 518 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 SF3B4Q15427 424 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL9A1-202ENST00000357250 FAM26DQ5JW98 314 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 CTSL3PQ5NE16 218 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 SPRED1Q7Z699 444 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 GALNT10Q86SR1 603 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF100Q8IYN0 542 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 L3MBTL4Q8NA19 623 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 FBXL3Q9UKT7 428 aa11.06□□□□□ -0.64
COL9A1-202ENST00000357250 AMY2AP04746 511 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 PRDX1Q06830 199 aaKnown RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 C3orf30Q96M34 536 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 PHB2Q99623 299 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 DPH1Q9BZG8 443 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 SAP130Q9H0E3 1048 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ICKQ9UPZ9 632 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF175Q9Y473 711 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 A0A1W2PPK0 400 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 SYT7O43581 403 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 BRINP1O60477 761 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 PAHP00439 452 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 MAS1P04201 325 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms