RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TMEM163Q8TC26 289 aa14□□□□□ -0.17
CHD4-201ENST00000357008 KCNJ16Q9NPI9 418 aa14□□□□□ -0.17
CHD4-201ENST00000357008 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
CHD4-201ENST00000357008 REV1Q9UBZ9 1251 aa14□□□□□ -0.17
CHD4-201ENST00000357008 CYP8B1Q9UNU6 501 aa14□□□□□ -0.17
CHD4-201ENST00000357008 IER3IP1Q9Y5U9 82 aa14□□□□□ -0.17
CHD4-201ENST00000357008 IFT172Q9UG01 1749 aa14□□□□□ -0.17
CHD4-201ENST00000357008 CTDSP2O14595 271 aa14□□□□□ -0.17
CHD4-201ENST00000357008 FBXO45P0C2W1 286 aa14□□□□□ -0.17
CHD4-201ENST00000357008 MC3RP41968 323 aa14□□□□□ -0.17
CHD4-201ENST00000357008 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
CHD4-201ENST00000357008 MFSD6LQ8IWD5 586 aa14□□□□□ -0.17
CHD4-201ENST00000357008 MDGA1Q8NFP4 955 aa14□□□□□ -0.17
CHD4-201ENST00000357008 THAP3Q8WTV1 239 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 SSX3Q99909 188 aa14□□□□□ -0.17
CHD4-201ENST00000357008 BABAM2Q9NXR7 383 aa14□□□□□ -0.17
CHD4-201ENST00000357008 FUT1P19526 365 aa14□□□□□ -0.17
CHD4-201ENST00000357008 SCD5Q86SK9 330 aa14□□□□□ -0.17
CHD4-201ENST00000357008 FAM109AQ8N4B1 249 aa14□□□□□ -0.17
CHD4-201ENST00000357008 ADAMTS16Q8TE57 1224 aa14□□□□□ -0.17
CHD4-201ENST00000357008 TGM7Q96PF1 710 aa14□□□□□ -0.17
CHD4-201ENST00000357008 NOX3Q9HBY0 568 aa14□□□□□ -0.17
CHD4-201ENST00000357008 RPS10P5Q9NQ39 176 aa14□□□□□ -0.17
CHD4-201ENST00000357008 TIMM8BQ9Y5J9 83 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 V9GY05 133 aa14□□□□□ -0.17
CHD4-201ENST00000357008 DCDC2BA2VCK2 349 aa14□□□□□ -0.17
CHD4-201ENST00000357008 IDH3GP51553 393 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
CHD4-201ENST00000357008 PEX11GQ96HA9 241 aa14□□□□□ -0.17
CHD4-201ENST00000357008 SAMD11Q96NU1 681 aa14□□□□□ -0.17
CHD4-201ENST00000357008 GMEB2Q9UKD1 530 aa14□□□□□ -0.17
CHD4-201ENST00000357008 DNMT3AQ9Y6K1 912 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 NPIPB15A6NHN6 443 aaPredicted RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 ALDOCP09972 364 aaKnown RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 CAV2P51636 162 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 PER3P56645 1201 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 METAP1DQ6UB28 335 aaPredicted RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 NEIL2Q969S2 332 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 DDIT4LQ96D03 193 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 MC2RQ01718 297 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 GALEQ14376 348 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 TPRA1Q86W33 373 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 MR1Q95460 341 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 FMN2Q9NZ56 1722 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 MROH6A6NGR9 719 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 GAAP10253 952 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 NKX6-1P78426 367 aaPredicted RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 LILRB2Q8N423 598 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 CHST14Q8NCH0 376 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 OR51T1Q8NGJ9 327 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 ZNF334Q9HCZ1 680 aaPredicted RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 FAM171A2A8MVW0 826 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 MPIG6BO95866 241 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 HMGN2P05204 90 aaKnown RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 ACP2P11117 423 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 EIF2B1Q14232 305 aaKnown RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 SLC6A19Q695T7 634 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 OR56B2PQ8NGI1 322 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 OR9A2Q8NGT5 310 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 POC1BQ8TC44 478 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 SLC25A18Q9H1K4 315 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 KCNIP1Q9NZI2 227 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 SRPX2O60687 465 aaPredicted RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 CASP3P42574 277 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 TDGQ13569 410 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 RAET1LQ5VY80 246 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 GPR137CQ8N3F9 429 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 DNTTIP1Q9H147 329 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 CWH43Q9H720 699 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 NAALAD2Q9Y3Q0 740 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 MYH7P12883 1935 aa13.99□□□□□ -0.17
CHD4-201ENST00000357008 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
CHD4-201ENST00000357008 GABRB3P28472 473 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 LRRTM3Q86VH5 581 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 SERPINA12Q8IW75 414 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 C12orf45Q8N5I9 185 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 MYLIPQ8WY64 445 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ELP4Q96EB1 424 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ZFYVE21Q9BQ24 234 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 PITHD1Q9GZP4 211 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 DZANK1Q9NVP4 752 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 CRTAPO75718 401 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 RBMS1P29558 406 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 GPR50Q13585 617 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 DYRK1AQ13627 763 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 GRM7Q14831 915 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 BCL2A1Q16548 175 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ZNF674Q2M3X9 581 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 PODNL1Q6PEZ8 512 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 TMEM102Q8N9M5 508 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 MALSU1Q96EH3 234 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 C20orf27Q9GZN8 174 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 B3GALT1Q9Y5Z6 326 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 FRS3O43559 492 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ZNF254O75437 659 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 C5AR1P21730 350 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 TAS2R20P59543 309 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 RAP2BP61225 183 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms