RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ALPK2Q86TB3 2170 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SLC19A2O60779 497 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 LILRB5O75023 590 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 FGBP02675 491 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 WNT1P04628 370 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 TPOP07202 933 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ADRB1P08588 477 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 HK1P19367 917 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 POLR2CP19387 275 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ACSL1P33121 698 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 THBS2P35442 1172 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 MMP12P39900 470 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 MC3RP41968 323 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CLCNKAP51800 687 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 BTN1A1Q13410 526 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 DUSP6Q16828 381 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 PGGHGQ32M88 737 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CCNJQ5T5M9 372 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 NUDT13Q86X67 352 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 GRAMD2AQ8IUY3 354 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SERPINA12Q8IW75 414 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CPXM2Q8N436 756 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 FTMTQ8N4E7 242 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RFLNBQ8N5W9 214 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 PIGXQ8TBF5 258 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 AICDAQ9GZX7 198 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CLEC4MQ9H2X3 399 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SLC35C2Q9NQQ7 365 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RDH8Q9NYR8 311 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 IL36AQ9UHA7 158 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ATG4BQ9Y4P1 393 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 DAPL1A0PJW8 107 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 GPR171O14626 319 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 SIGLEC5O15389 551 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 GKN3PP0CG01 181 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 POU3F2P20265 443 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 GSTM3P21266 225 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 CST5P28325 142 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 NOS3P29474 1203 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 MAGEB1P43366 347 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 OR12D2P58182 307 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 SIM1P81133 766 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 SIGLEC14Q08ET2 396 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 CAMK2DQ13557 499 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 ANGPT1Q15389 498 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 MPP7Q5T2T1 576 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 HBMQ6B0K9 141 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 CD300LDQ6UXZ3 194 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 OAFQ86UD1 273 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 LRRC28Q86X40 367 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 OR5W2Q8NH69 310 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 GANCQ8TET4 914 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 THAP4Q8WY91 577 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 RFKQ969G6 155 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 CNRIP1Q96F85 164 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 DDOQ99489 341 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 TIMP4Q99727 224 aa9.46□□□□□ -0.89
PTPRA-203ENST00000356147 ZCCHC2Q9C0B9 1178 aaKnown RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 MRPS18AQ9NVS2 196 aaKnown RBP9.46□□□□□ -0.89
PTPRA-203ENST00000356147 NPIPA5A0A0B4J1W7 369 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 NPIPA7E9PJI5 369 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 CHST10O43529 356 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 TGM5O43548 720 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 SOX30O94993 753 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 ZIC2O95409 532 aaPredicted RBP9.46□□□□□ -0.9
PTPRA-203ENST00000356147 LRG1P02750 347 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 NPIPA8P0DM63 369 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 RAB33AQ14088 237 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 MFSD13AQ14CX5 517 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 TRAM2Q15035 370 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF805Q5CZA5 627 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 SHISA5Q8N114 240 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 ARL14Q8N4G2 192 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 ACBD7Q8N6N7 88 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 OR9A2Q8NGT5 310 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 UBE2E3Q969T4 207 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 MCHR1Q99705 422 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 AIF1LQ9BQI0 150 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 FAIM2Q9BWQ8 316 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 BABAM2Q9NXR7 383 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 SLC7A7Q9UM01 511 aa9.46□□□□□ -0.9
PTPRA-203ENST00000356147 WASH3PC4AMC7 463 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 GMDSO60547 372 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PRG2P13727 222 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ACADLP28330 430 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PYCR1P32322 319 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 MAP2K6P52564 334 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZP1P60852 638 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF782Q6ZMW2 699 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 Q6ZTK2 550 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RASSF6Q6ZTQ3 369 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms