RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ID2Q02363 134 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 MXD1Q05195 221 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 PRICKLE4Q2TBC4 344 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 GID4Q8IVV7 300 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 KLHL36Q8N4N3 616 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 CHAC2Q8WUX2 184 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEM74BQ9NUR3 256 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 MRPS2Q9Y399 296 aaKnown RBP20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 PRAMEF26H0Y7S4 382 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 AKAP8O43823 692 aaKnown RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 SEMA4FO95754 770 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 IGHA1P01876 353 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 TMED10P49755 219 aaKnown RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 RPS25P62851 125 aaKnown RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 OR1Q1Q15612 314 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 MAPK14Q16539 360 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 RPL13AP3Q6NVV1 102 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 ABI3BPQ7Z7G0 1075 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 LHFPL3Q86UP9 236 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 OR52N1Q8NH53 320 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 SAMD8Q96LT4 415 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CD180Q99467 661 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 UBQLN3Q9H347 655 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 FN3KQ9H479 309 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CBLCQ9ULV8 474 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CLCA2Q9UQC9 943 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 TCRBV21S2A2A0A5A6 115 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CDHR4A6H8M9 788 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CDC42EP2O14613 210 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 SPNP16150 400 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 ATP6V1E1P36543 226 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 MAP3K8P41279 467 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 GCGRP47871 477 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 LSSP48449 732 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 HNRNPA0Q13151 305 aaKnown RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 MRPL2Q5T653 305 aaKnown RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 LAX1Q8IWV1 398 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CDK20Q8IZL9 346 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CSNK1A1LQ8N752 337 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 OR52L1Q8NGH7 329 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEM239Q8WW34 195 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 EVA1BQ9NVM1 165 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 C14orf119Q9NWQ9 140 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 MAT2BQ9NZL9 334 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 PLEKHB1Q9UF11 243 aaPredicted RBP20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 PCDHGB2Q9Y5G2 931 aa20.69■□□□□ 0.9
NKX2-1-201ENST00000354822 CEP290O15078 2479 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 BMP7P18075 431 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 SDC2P34741 201 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 AKAP14Q86UN6 197 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEFF1Q8IYR6 380 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 CA13Q8N1Q1 262 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 OR4F15Q8NGB8 312 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 MIR1-1HGQ9H1L0 117 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 C14orf105Q9NVL8 296 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 SIDT1Q9NXL6 827 aaKnown RBP20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF223Q9UK11 482 aaPredicted RBP20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEM5Q9Y2B1 443 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 HLA-DPB1P04440 258 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 PVRP15151 417 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 GABRG2P18507 467 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 POU6F2P78424 691 aaPredicted RBP20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 SHC2P98077 582 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 MGAT2Q10469 447 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 DDI2Q5TDH0 399 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 CXXC5Q7LFL8 322 aaKnown RBP20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 SHFQ7M4L6 423 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 PRSS41Q7RTY9 318 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 FAM181AQ8N9Y4 354 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 OR13H1Q8NG92 308 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 PATE1Q8WXA2 126 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 CTHRC1Q96CG8 243 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 HS6ST2Q96MM7 605 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 OR52D1Q9H346 318 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 SACM1LQ9NTJ5 587 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 TOR4AQ9NXH8 423 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 TNFRSF10DQ9UBN6 386 aa20.68■□□□□ 0.9
NKX2-1-201ENST00000354822 FANCMQ8IYD8 2048 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 CENPVL1A0A0U1RR11 272 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 RCBTB2O95199 551 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 HTR2AP28223 471 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 XKRXQ6PP77 449 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 OOSP2Q86WS3 158 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 TM9SF2Q99805 663 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 CCDC3Q9BQI4 270 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 KATNB1Q9BVA0 655 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 SRRQ9GZT4 340 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF576Q9H609 170 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 ABCB9Q9NP78 766 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 MUTYHQ9UIF7 546 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 MMP17Q9ULZ9 603 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 CSNK1G3Q9Y6M4 447 aa20.67■□□□□ 0.9
NKX2-1-201ENST00000354822 A0A1W2PQL4 384 aaPredicted RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 C10orf142B7Z368 130 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 BRINP1O60477 761 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 GABRA3P34903 492 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 TPTEP56180 551 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 RAB38P57729 211 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 FABP5Q01469 135 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 SELENBP1Q13228 472 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms