RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SLC9B1P1A6NJY1 282 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 H3BML4 177 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 H3BQ06 376 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 ZNF217O75362 1048 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 IMPA1P29218 277 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 HSD11B2P80365 405 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 METTL25Q8N6Q8 603 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 HCFC2Q9Y5Z7 792 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 TRAV18A0A075B6X5 111 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 PRPS1P60891 318 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 AIMP2Q13155 320 aaKnown RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 EEF1A1P5Q5VTE0 462 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 BPIFA2Q96DR5 249 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 HHIPQ96QV1 700 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 TMEM121BQ9BXQ6 578 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 SLC25A18Q9H1K4 315 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 TAS2R3Q9NYW6 316 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 AGAP5A6NIR3 686 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 CTBSQ01459 385 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 LRRC69Q6ZNQ3 347 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 TANKQ92844 425 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 DDIT4LQ96D03 193 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 INSM2Q96T92 566 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 NCDNQ9UBB6 729 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 KCNIP3Q9Y2W7 256 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 PRAMEF26H0Y7S4 382 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 ERCC1P07992 297 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 LSSP48449 732 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 PITPNBP48739 271 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 RGS6P49758 472 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 ERVK-25P63136 954 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 SERTAD2Q14140 314 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 BEST3Q8N1M1 668 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 LPAR4Q99677 370 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 KLHL9Q9P2J3 617 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 DRD1P21728 446 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 HOXC13P31276 330 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 GAREM2Q75VX8 874 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 NAA11Q9BSU3 229 aaPredicted RBP15.06■□□□□ 0
PTPN11-201ENST00000351677 CPNE5Q9HCH3 593 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 KCNN3Q9UGI6 736 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 HS3ST2Q9Y278 367 aa15.06■□□□□ 0
PTPN11-201ENST00000351677 A6NIN4 97 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 COL28A1Q2UY09 1125 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 TMEM205Q6UW68 189 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 SBSNQ6UWP8 590 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 ADAMTS19Q8TE59 1207 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 HOXB13Q92826 284 aaPredicted RBP15.05■□□□□ 0
PTPN11-201ENST00000351677 HSFX1Q9UBD0 423 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 TRBV4-1A0A0J9YWV2 114 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 ERVFC1P60507 584 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 TMEM207Q6UWW9 146 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 GDPGP1Q6ZNW5 385 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 METTL4Q8N3J2 472 aa15.05■□□□□ 0
PTPN11-201ENST00000351677 ZNF443Q9Y2A4 671 aaPredicted RBP15.05■□□□□ 0
PTPN11-201ENST00000351677 PRRC2BQ5JSZ5 2229 aaKnown RBP15.05■□□□□ 0
PTPN11-201ENST00000351677 ZNF850A8MQ14 1090 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 EEF1E1-BLOC1S5C9J1V9 151 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 AMY2AP04746 511 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 DAPP51397 102 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 TLE3Q04726 772 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 FAM78AQ5JUQ0 283 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 ZSCAN4Q8NAM6 433 aaPredicted RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 F11P03951 625 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 SFTPDP35247 375 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 EIF2B1Q14232 305 aaKnown RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 ERV3-1Q14264 604 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 CD300LFQ8TDQ1 290 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 ACOT11Q8WXI4 607 aaPredicted RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 PITHD1Q9GZP4 211 aaPredicted RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 KATNBL1Q9H079 304 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 OR52D1Q9H346 318 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 EGLN3Q9H6Z9 239 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 VDAC3Q9Y277 283 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 HMGB3O15347 200 aaKnown RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 TFAP2AP05549 437 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 SLC2A5P22732 501 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 OTX2P32243 289 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 HTR2BP41595 481 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 RAB40BQ12829 278 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 AWAT2Q6E213 333 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 MCATQ8IVS2 390 aaKnown RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 LAS2Q8IYD9 372 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 TMEFF1Q8IYR6 380 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 OR5K2Q8NHB8 316 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 TOE1Q96GM8 510 aaKnown RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 BMFQ96LC9 184 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 UHRF1Q96T88 793 aaPredicted RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 LMAN1LQ9HAT1 526 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 CD93Q9NPY3 652 aa15.05■□□□□ -0
PTPN11-201ENST00000351677 DDX60LQ5H9U9 1706 aaKnown RBP15.05■□□□□ -0
PTPN11-201ENST00000351677 XCR1P46094 333 aa15.04■□□□□ -0
PTPN11-201ENST00000351677 GGTA1PQ4G0N0 100 aa15.04■□□□□ -0
PTPN11-201ENST00000351677 RNASE10Q5GAN6 216 aaKnown RBP15.04■□□□□ -0
PTPN11-201ENST00000351677 SERPINA12Q8IW75 414 aa15.04■□□□□ -0
PTPN11-201ENST00000351677 LINC01465Q8N7H1 131 aa15.04■□□□□ -0
PTPN11-201ENST00000351677 NLGN4YQ8NFZ3 816 aaPredicted RBP15.04■□□□□ -0
PTPN11-201ENST00000351677 OR6C2Q9NZP2 312 aa15.04■□□□□ -0
PTPN11-201ENST00000351677 KCNS2Q9ULS6 477 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms