RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 PFDN4Q9NQP4 134 aa13.93□□□□□ -0.18
COPE-202ENST00000349893 SLC35C2Q9NQQ7 365 aa13.93□□□□□ -0.18
COPE-202ENST00000349893 CBLN4Q9NTU7 201 aa13.93□□□□□ -0.18
COPE-202ENST00000349893 CPSF2Q9P2I0 782 aaKnown RBP13.93□□□□□ -0.18
COPE-202ENST00000349893 C19orf53Q9UNZ5 99 aaPredicted RBP13.93□□□□□ -0.18
COPE-202ENST00000349893 VDAC3Q9Y277 283 aa13.93□□□□□ -0.18
COPE-202ENST00000349893 HMX2A2RU54 273 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ZNF814B7Z6K7 855 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 SPRY1O43609 319 aaPredicted RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 SLITRK5O94991 958 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ADAP00813 363 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 IL3P08700 152 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 CSF3P09919 207 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 USF1P22415 310 aaPredicted RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 TTKP33981 857 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ARL1P40616 181 aaPredicted RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.18
COPE-202ENST00000349893 CSTF3Q12996 717 aaKnown RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 NAB1Q13506 487 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ZNF239Q16600 458 aaKnown RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 TECRLQ5HYJ1 363 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 CPTPQ5TA50 214 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 HBMQ6B0K9 141 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 FAM166AQ6J272 317 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 PPM1NQ8N819 430 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 PTGR2Q8N8N7 351 aaPredicted RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 OR4F6Q8NGB9 312 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ACTRT2Q8TDY3 377 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 ABHD3Q8WU67 409 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 OSTF1Q92882 214 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 EXOSC8Q96B26 276 aaKnown RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 MANSC1Q9H8J5 431 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 L2HGDHQ9H9P8 463 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 NMRK1Q9NWW6 199 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 MRTO4Q9UKD2 239 aaKnown RBP13.92□□□□□ -0.18
COPE-202ENST00000349893 KCNS2Q9ULS6 477 aa13.92□□□□□ -0.18
COPE-202ENST00000349893 SLC35F4A4IF30 521 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 ALG1L2C9J202 215 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 ABCD4O14678 606 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 UTS2O95399 124 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 NTN1O95631 604 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 NGFRP08138 427 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 HSD3B1P14060 373 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 HSD3B2P26439 372 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 MPIP34949 423 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 PSMD4P55036 377 aaKnown RBP13.91□□□□□ -0.18
COPE-202ENST00000349893 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
COPE-202ENST00000349893 SQLEQ14534 574 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 PLPPR5Q32ZL2 321 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 SH2D4BQ5SQS7 431 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 PDSS1Q5T2R2 415 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 KLC3Q6P597 504 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 Q6ZT83 130 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 BHLHA15Q7RTS1 189 aaPredicted RBP13.91□□□□□ -0.18
COPE-202ENST00000349893 TRABD2AQ86V40 505 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 TUSC5Q8IXB3 177 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 OR2L13Q8N349 312 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 SELENOMQ8WWX9 145 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 DHRS9Q9BPW9 319 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 LMF2Q9BU23 707 aaKnown RBP13.91□□□□□ -0.18
COPE-202ENST00000349893 Q9N2J8 555 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 GIMAP4Q9NUV9 329 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 NPAP1Q9NZP6 1156 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 SNX6Q9UNH7 406 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 PKD1L1Q8TDX9 2849 aa13.91□□□□□ -0.18
COPE-202ENST00000349893 A0A1W2PRB8 838 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 E7EQL1 145 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 ESRRBO95718 433 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 OPN1LWP04000 364 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
COPE-202ENST00000349893 TCP1P17987 556 aaKnown RBP13.9□□□□□ -0.18
COPE-202ENST00000349893 PTNP21246 168 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 CARD18P57730 90 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 HEPACAMQ14CZ8 416 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 PPA1Q15181 289 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 RAB35Q15286 201 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 TIMM23BQ5SRD1 257 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 Q6ZSR9 355 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 POC1BQ8TC44 478 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 HOXB13Q92826 284 aaPredicted RBP13.9□□□□□ -0.18
COPE-202ENST00000349893 CPNE4Q96A23 557 aaPredicted RBP13.9□□□□□ -0.18
COPE-202ENST00000349893 KLHL15Q96M94 604 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 RNF145Q96MT1 663 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 MED17Q9NVC6 651 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 SENP1Q9P0U3 644 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 ZNF225Q9UK10 706 aa13.9□□□□□ -0.18
COPE-202ENST00000349893 TGP01266 2768 aa13.89□□□□□ -0.19
COPE-202ENST00000349893 A0A096LPK6 155 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms