RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 OR4Q3Q8NH05 313 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 SORCS1Q8WY21 1168 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 SCAMP4Q969E2 229 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 EXOSC8Q96B26 276 aaKnown RBP14.36□□□□□ -0.11
LMNA-201ENST00000347559 UROC1Q96N76 676 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 SLC6A20Q9NP91 592 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 PRKAG2Q9UGJ0 569 aa14.36□□□□□ -0.11
LMNA-201ENST00000347559 H0YC42 278 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 COCHO43405 550 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 PIP5K1CO60331 668 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 SELENOFO60613 162 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 REM1O75628 298 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 EGFP01133 1207 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 GSTM3P21266 225 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 IMPA1P29218 277 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 HOXA1P49639 335 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 MMP15P51511 669 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 RAG2P55895 527 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 TAS2R41P59536 307 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 KLF9Q13886 244 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 PDE7AQ13946 482 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 ENTPD8Q5MY95 495 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 MPP7Q5T2T1 576 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 HSD17B13Q7Z5P4 300 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 TMEM99Q8N816 258 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 OR5W2Q8NH69 310 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 BCL7CQ8WUZ0 217 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 ZNF649Q9BS31 505 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 NKX6-2Q9C056 277 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 ELAC1Q9H777 363 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 CPSF4LA6NMK7 179 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 MRPL3P09001 348 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 RAB3BP20337 219 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 RPL3P39023 403 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 GDI2P50395 445 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 SEC61A1P61619 476 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 FZD5Q13467 585 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 FAM74A1Q5RGS3 127 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 PLEKHS1Q5SXH7 462 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 C18orf63Q68DL7 685 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 GSG1LQ6UXU4 331 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 SLCO4C1Q6ZQN7 724 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 SERPINA12Q8IW75 414 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 HDDC3Q8N4P3 179 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 C2orf73Q8N5S3 287 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 OR52B4Q8NGK2 314 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 ZNF707Q96C28 371 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 IFT27Q9BW83 186 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 A4GALTQ9NPC4 353 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 MYNNQ9NPC7 610 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 MED9Q9NWA0 146 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 ACAD8Q9UKU7 415 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 PLCL2Q9UPR0 1127 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 KLF2Q9Y5W3 355 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 PDE4DIPQ5VU43 2346 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 DAPL1A0PJW8 107 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 SIGLEC6O43699 453 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 NFATC1O95644 943 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 RECQLP46063 649 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 UBE2MP61081 183 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 PLD1Q13393 1074 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 AADACL4Q5VUY2 407 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 GDF6Q6KF10 455 aaPredicted RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 CD300LDQ6UXZ3 194 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 CXXC5Q7LFL8 322 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 TBC1D19Q8N5T2 526 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 ACBD7Q8N6N7 88 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 NEURL3Q96EH8 262 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 OR1F2PQ96R84 312 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 ESRP2Q9H6T0 727 aaKnown RBP14.35□□□□□ -0.11
LMNA-201ENST00000347559 DMRT3Q9NQL9 472 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 TAS2R3Q9NYW6 316 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 CA5BQ9Y2D0 317 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
LMNA-201ENST00000347559 OR6C74A6NCV1 312 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 SLC16A5O15375 505 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 B4GALT2O60909 372 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 UCHL1P09936 223 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 GABRA1P14867 456 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 ATF1P18846 271 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 RNF144AP50876 292 aaPredicted RBP14.34□□□□□ -0.11
LMNA-201ENST00000347559 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
LMNA-201ENST00000347559 PLBD1Q6P4A8 553 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 APOOLQ6UXV4 268 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 CHST9Q7L1S5 443 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 KAT2AQ92830 837 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 NOX3Q9HBY0 568 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 HRASLSQ9HDD0 168 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 HINT3Q9NQE9 182 aaKnown RBP14.34□□□□□ -0.11
LMNA-201ENST00000347559 MED11Q9P086 117 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 PRRC2BQ5JSZ5 2229 aaKnown RBP14.34□□□□□ -0.11
LMNA-201ENST00000347559 TDRD15B5MCY1 1934 aaKnown RBP14.34□□□□□ -0.11
LMNA-201ENST00000347559 A0A0G2JK05 382 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 SLC38A8A6NNN8 435 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 KHDRBS3O75525 346 aaKnown RBP14.34□□□□□ -0.11
LMNA-201ENST00000347559 KLHL18O94889 574 aa14.34□□□□□ -0.11
LMNA-201ENST00000347559 PTHLHP12272 177 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms