RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FBXL3Q9UKT7 428 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 YIPF1Q9Y548 306 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ERVFC1P60507 584 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MEF2AQ02078 507 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GNMTQ14749 295 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF791Q3KP31 576 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ENTPD8Q5MY95 495 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF440Q8IYI8 595 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PNPLA1Q8N8W4 532 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CD300LFQ8TDQ1 290 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TM9SF4Q92544 642 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GSKIPQ9P0R6 139 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 A6NL46 340 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 NUPL2O15504 423 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MAOAP21397 527 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ADH7P40394 386 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR13C3Q8NGS6 347 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MFSD8Q8NHS3 518 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC25A37Q9NYZ2 338 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CAMK2AQ9UQM7 478 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RBM7Q9Y580 266 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SCN9AQ15858 1988 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 HHLA1C9JL84 531 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ADH5P11766 374 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GRK5P34947 590 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 AQP6Q13520 282 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PXDC1Q5TGL8 231 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 Q6ZVL8 140 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SERINC5Q86VE9 423 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CACUL1Q86Y37 369 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR4F15Q8NGB8 312 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 NPLOC4Q8TAT6 608 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 DDX31Q9H8H2 851 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TNFRSF12AQ9NP84 129 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 LTB4R2Q9NPC1 389 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 COPS3Q9UNS2 423 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 A0A0G2JN53 185 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 KIAA0355O15063 1070 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SULT1B1O43704 296 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GJB5O95377 273 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PRPH2P23942 346 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 IL13RA1P78552 427 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 BCL2A1Q16548 175 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR2AJ1Q8NGZ0 328 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MRPL15Q9P015 296 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEFF2Q9UIK5 374 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ETV7Q9Y603 341 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GAPDHSO14556 408 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ADAM12O43184 909 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PRSS23O95084 383 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SPARCP09486 303 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 FURINP09958 794 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 AKR1C4P17516 323 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 VAMP2P63027 116 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GBX1Q14549 363 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 YIF1BQ5BJH7 314 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ALG10BQ5I7T1 473 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC6A19Q695T7 634 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TXNDC8Q6A555 127 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PRSS42Q7Z5A4 293 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM179BQ7Z7N9 219 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GRAMD2AQ8IUY3 354 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 APCDD1Q8J025 514 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 KIAA1958Q8N8K9 716 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM185AQ8NFB2 350 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PXT1Q8NFP0 134 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR52N1Q8NH53 320 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SMAP2Q8WU79 429 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 C5orf34Q96MH7 638 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MS4A4EQ96PG1 132 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR2A14Q96R47 310 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ASF1BQ9NVP2 202 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TAS2R16Q9NYV7 291 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MAFFQ9ULX9 164 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF878C9JN71 531 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RPS15AP62244 130 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RPS26P62854 115 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 NUP54Q7Z3B4 507 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 FIBINQ8TAL6 211 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SH3RF2Q8TEC5 729 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM239Q8WW34 195 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RAD9AQ99638 391 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PKMYT1Q99640 499 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PITX2Q99697 317 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 KATNB1Q9BVA0 655 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RNF167Q9H6Y7 350 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CNIH4Q9P003 139 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3DA0A087WVF3 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3IA0A087WXS9 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3EA0A087X179 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3KA0A087X1G2 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3FA6NER0 549 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3LB9A6J9 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3HP0C7X1 549 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 DLSTP36957 453 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RGS19P49795 217 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 LMAN2Q12907 356 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TBC1D3GQ6DHY5 549 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms