RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM173Q86WV6 379 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 BVESQ8NE79 360 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 OR5D16Q8NGK9 328 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 OR9A1PQ8NGU1 263 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 POF1BQ8WVV4 589 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ELMOD3Q96FG2 381 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CASD1Q96PB1 797 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SLC22A12Q96S37 553 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 RHBGQ9H310 441 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CA5BQ9Y2D0 317 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CHST2Q9Y4C5 530 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 TRAV1-2A0A0B4J238 106 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 AIPO00170 330 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 OR2A4O95047 310 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 POP4O95707 220 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 TAS2R41P59536 307 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 TAS2R43P59537 309 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 RAP2BP61225 183 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 E2F1Q01094 437 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 TLE2Q04725 743 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 SNTB2Q13425 540 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 CAMK1Q14012 370 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 GRIN2CQ14957 1233 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 DECR1Q16698 335 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 LRRC73Q5JTD7 316 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 KHDRBS2Q5VWX1 349 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 NIPAL3Q6P499 406 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 LRFN4Q6PJG9 635 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 ADCK2Q7Z695 626 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 NAXDQ8IW45 347 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 TMEM99Q8N816 258 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 NLGN2Q8NFZ4 835 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 OR5W2Q8NH69 310 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 SETD7Q8WTS6 366 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 SCARB1Q8WTV0 552 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 BCL7CQ8WUZ0 217 aaPredicted RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 THAP4Q8WY91 577 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 KISS1RQ969F8 398 aaPredicted RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 CMTM3Q96MX0 182 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 FCRL4Q96PJ5 515 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 OR2A7Q96R45 310 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 MS4A8Q9BY19 250 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 SLC6A15Q9H2J7 730 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 FN3KQ9H479 309 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 ZDHHC6Q9H6R6 413 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 ELAC1Q9H777 363 aaKnown RBP9.02□□□□□ -0.96
HOXA1-201ENST00000343060 KCNK12Q9HB15 430 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 SEMA4GQ9NTN9 838 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF175Q9Y473 711 aa9.02□□□□□ -0.96
HOXA1-201ENST00000343060 A0A0G2JPF8 293 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 NAP1L6A6NFF2 107 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 HNRNPCL2B2RXH8 293 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 HNRNPCL3B7ZW38 293 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 MCRIP1C9JLW8 97 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 TOXO94900 526 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 EFEMP2O95967 443 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 CH25HO95992 272 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 TFP02787 698 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ASGR2P07307 311 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 HNRNPCL4P0DMR1 293 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ALPPL2P10696 532 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 TBXA2RP21731 343 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 MECP2P51608 486 aaKnown RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 CCR8P51685 355 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ST3GAL3Q11203 375 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 EIF2B5Q13144 721 aaKnown RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 MAPK14Q16539 360 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM64Q6YI46 380 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 Q6ZVL8 140 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 CXXC5Q7LFL8 322 aaKnown RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 KRT78Q8N1N4 520 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 OR2T33Q8NG76 320 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 OR51G2Q8NGK0 314 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 MOSPD2Q8NHP6 518 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ABHD4Q8TB40 342 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 XAGE5Q8WWM1 108 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ACOT11Q8WXI4 607 aaPredicted RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 RIOK2Q9BVS4 552 aaKnown RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 MS4A7Q9GZW8 240 aaPredicted RBP9.02□□□□□ -0.97
HOXA1-201ENST00000343060 EPHX3Q9H6B9 360 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 WDR26Q9H7D7 661 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 LHX9Q9NQ69 397 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 CTPS2Q9NRF8 586 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 OR6C2Q9NZP2 312 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 PFDN2Q9UHV9 154 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 BAIAP2Q9UQB8 552 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 PRELID3BQ9Y3B1 194 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 YIPF1Q9Y548 306 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 THSD7BQ9C0I4 1608 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 KIAA1549LQ6ZVL6 1849 aa9.02□□□□□ -0.97
HOXA1-201ENST00000343060 A0A1B0GTQ1 180 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 WASH3PC4AMC7 463 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms