RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 C18orf63Q68DL7 685 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LRRC56Q8IYG6 542 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 SFXN5Q8TD22 340 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TGM7Q96PF1 710 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PELOQ9BRX2 385 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 KLRF1Q9NZS2 232 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SEMA4FO95754 770 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 XCR1P46094 333 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 B4GALNT1Q00973 533 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LRRC26Q2I0M4 334 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 INAVAQ3KP66 663 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ACSM3Q53FZ2 586 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PGBD2Q6P3X8 592 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ADIPOR2Q86V24 386 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PLPP6Q8IY26 295 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TRMT10AQ8TBZ6 339 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 SPPL3Q8TCT6 385 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 BCL2L14Q9BZR8 327 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 CLEC2DQ9UHP7 191 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SLC35A3Q9Y2D2 325 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TEX13CA0A0J9YWL9 993 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 KDM4BO94953 1096 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 APBB3O95704 486 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SCG5P05408 212 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 CPMP14384 443 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SLC1A3P43003 542 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PLCXD2Q0VAA5 305 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ATXN7L3Q14CW9 347 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 ABHD17CQ6PCB6 329 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LAX1Q8IWV1 398 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RBM38Q9H0Z9 239 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 EVA1BQ9NVM1 165 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SCP2D1Q9UJQ7 156 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RASD1Q9Y272 281 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 AK6Q9Y3D8 172 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 SMAD9O15198 467 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 CLEC2LP0C7M8 214 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 MMP11P24347 488 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 UGT2B10P36537 528 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 EIF2DP41214 584 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 MAGEA2P43356 314 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 FAM111BQ6SJ93 734 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 Q6ZNB5 142 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 BTN2A1Q7KYR7 527 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR2L8Q8NGY9 312 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR5W2Q8NH69 310 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 C19orf43Q9BQ61 176 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CA5BQ9Y2D0 317 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 NOP16Q9Y3C1 178 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 UCHL1P09936 223 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 F3P13726 295 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HOXD12P35452 270 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 IRS1P35568 1242 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HNRNPFP52597 415 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 REEP5Q00765 189 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 RASGEF1BQ0VAM2 473 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 IHHQ14623 411 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SWI5Q1ZZU3 235 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 C3orf38Q5JPI3 329 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 DCST2Q5T1A1 773 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SLC7A5P1Q8MH63 180 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CADM3Q8N126 398 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SLC16A11Q8NCK7 471 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR6N1Q8NGY5 312 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR8S1Q8NH09 359 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 DAZLQ92904 295 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 NXPE3Q969Y0 559 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 PLCXD1Q9NUJ7 323 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SIDT1Q9NXL6 827 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZNF639Q9UID6 485 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 MAB21L2Q9Y586 359 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 KIAA0355O15063 1070 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SLC6A9P48067 706 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 PITPNBP48739 271 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SLC14A1Q13336 389 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 LEG1Q6P5S2 330 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 LYSMD2Q8IV50 215 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HHIPL1Q96JK4 782 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TXNL4BQ9NX01 149 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 COPZ2Q9P299 210 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 POU2F3Q9UKI9 436 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HMX3A6NHT5 357 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 SYT5O00445 386 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CD3GP09693 182 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CTGFP29279 349 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 FGFBP1Q14512 234 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 GRM7Q14831 915 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 KIAA0040Q15053 153 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZNF750Q32MQ0 723 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HES5Q5TA89 166 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TANGO2Q6ICL3 276 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 NOXA1Q86UR1 476 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZNF440Q8IYI8 595 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms