RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KRT16P08779 473 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 IGFBP2P18065 325 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 UQCRC2P22695 453 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 DPP4P27487 766 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 LCN1P31025 176 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 IDH3AP50213 366 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 B3GALT5-AS1P59052 145 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 TLE4Q04727 773 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 PMPCAQ10713 525 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 STX5Q13190 355 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 TESK1Q15569 626 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 GSTA3Q16772 222 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 DCST2Q5T1A1 773 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 C1orf185Q5T7R7 199 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 BHLHB9Q6PI77 547 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 B3GNT6Q6ZMB0 384 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 SEM1Q6ZVN7 128 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 ACAD11Q709F0 780 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 GLB1L3Q8NCI6 653 aaPredicted RBP13.96□□□□□ -0.17
VAPA-201ENST00000340541 VPS37AQ8NEZ2 397 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 OR14L1PQ8NHC6 308 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 MIPOL1Q8TD10 442 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 DUSP19Q8WTR2 217 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 DYDC1Q8WWB3 177 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 ABTB1Q969K4 478 aaPredicted RBP13.96□□□□□ -0.17
VAPA-201ENST00000340541 WDYHV1Q96HA8 205 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 MAGEB18Q96M61 343 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 EBF4Q9BQW3 602 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 INPP5KQ9BT40 448 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 G6PC3Q9BUM1 346 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 TBL1XR1Q9BZK7 514 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 TAS2R10Q9NYW0 307 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 ZIM2Q9NZV7 527 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 PCDHGB4Q9UN71 923 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 RNF6Q9Y252 685 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 ANKRD17O75179 2603 aaKnown RBP13.96□□□□□ -0.17
VAPA-201ENST00000340541 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.18
VAPA-201ENST00000340541 CELSR1Q9NYQ6 3014 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 KDM4EB2RXH2 506 aaPredicted RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 NPIPB9F8W1W9 429 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 UBDO15205 165 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 SLC22A3O75751 556 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 SOX30O94993 753 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 HOXD4P09016 255 aaPredicted RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 GABRA1P14867 456 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 ADH7P40394 386 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 CDKN2CP42773 168 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 MRPL19P49406 292 aaKnown RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 CLK3P49761 638 aaKnown RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 DSCR4P56555 118 aaPredicted RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 C17orf67Q0P5P2 114 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 ACSF3Q4G176 576 aaPredicted RBP13.95□□□□□ -0.18
VAPA-201ENST00000340541 SAXO2Q658L1 398 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 IFNEQ86WN2 208 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 OR4K17Q8NGC6 315 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 OR9I1Q8NGQ6 314 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 CHMP6Q96FZ7 201 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 OR52E6Q96RD3 313 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 KCNJ16Q9NPI9 418 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 ALKBH4Q9NXW9 302 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 DKKL1Q9UK85 242 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 ITGB1BP2Q9UKP3 347 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 HIVEP1P15822 2718 aa13.95□□□□□ -0.18
VAPA-201ENST00000340541 A0A1W2PQD3 144 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 AHRRA9YTQ3 701 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 TOXO94900 526 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 CPN1P15169 458 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 MATN1P21941 496 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 STARP49675 285 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 LHX2P50458 406 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 CASP9P55211 416 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 CD226Q15762 336 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
VAPA-201ENST00000340541 HEPHL1Q6MZM0 1159 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 CDH24Q86UP0 819 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 CCDC71Q8IV32 467 aaPredicted RBP13.94□□□□□ -0.18
VAPA-201ENST00000340541 CHDHQ8NE62 594 aaPredicted RBP13.94□□□□□ -0.18
VAPA-201ENST00000340541 NEURL3Q96EH8 262 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 C1GALT1C1Q96EU7 318 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 SDF2Q99470 211 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 ZBTB18Q99592 522 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 KLHDC3Q9BQ90 382 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 OR51I1Q9H343 314 aa13.94□□□□□ -0.18
VAPA-201ENST00000340541 RPH3AQ9Y2J0 694 aaPredicted RBP13.94□□□□□ -0.18
VAPA-201ENST00000340541 NPIPA5A0A0B4J1W7 369 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 A0A0G2JNJ9 132 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 NPIPA7E9PJI5 369 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 POLR3GO15318 223 aaPredicted RBP13.93□□□□□ -0.18
VAPA-201ENST00000340541 NDUFB5O43674 189 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 EPPINO95925 133 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 IL6P05231 212 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 NPIPA8P0DM63 369 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 TCEA1P23193 301 aaKnown RBP13.93□□□□□ -0.18
VAPA-201ENST00000340541 CHMP24386 653 aa13.93□□□□□ -0.18
VAPA-201ENST00000340541 AQP5P55064 265 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms