RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 EIF1P41567 113 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 GCGRP47871 477 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 SBSNQ6UWP8 590 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ANKRD27Q96NW4 1050 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 DCUN1D5Q9BTE7 237 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 PCDHGB2Q9Y5G2 931 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 WIF1Q9Y5W5 379 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 A0A1W2PQF6 199 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 CD82P27701 267 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 CBX3Q13185 183 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 DAG1Q14118 895 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 GINS1Q14691 196 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 AAED1Q7RTV5 226 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 METTL25Q8N6Q8 603 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ALG14Q96F25 216 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 AMDHD1Q96NU7 426 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 DLEC1Q9Y238 1755 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 MSX1P28360 303 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 KHDC1Q4VXA5 237 aaKnown RBP11.97□□□□□ -0.49
LIN54-201ENST00000340417 CLEC14AQ86T13 490 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 SLC15A3Q8IY34 581 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 TSLPQ969D9 159 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 C12orf49Q9H741 205 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 P4HTMQ9NXG6 502 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ATG4BQ9Y4P1 393 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 KDM4BO94953 1096 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 PRPS1P60891 318 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ARFRP1Q13795 201 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 MORN4Q8NDC4 146 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 BORCS8Q96FH0 119 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
LIN54-201ENST00000340417 KLHL31Q9H511 634 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 NDRG3Q9UGV2 375 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 PPT2Q9UMR5 302 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 A0A1W2PQ72 361 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 LCATP04180 440 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 GABRB3P28472 473 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ZNF750Q32MQ0 723 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 LRFN4Q6PJG9 635 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 MRPL21Q7Z2W9 205 aaKnown RBP11.97□□□□□ -0.49
LIN54-201ENST00000340417 SYT14Q8NB59 555 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 OR52E2Q8NGJ4 325 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ENKURQ8TC29 256 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 TPK1Q9H3S4 243 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 SLC27A4Q6P1M0 643 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 YRDCQ86U90 279 aaKnown RBP11.97□□□□□ -0.49
LIN54-201ENST00000340417 GID4Q8IVV7 300 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 OR2T4Q8NH00 348 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ULBP2Q9BZM5 246 aa11.97□□□□□ -0.49
LIN54-201ENST00000340417 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
LIN54-201ENST00000340417 OR6C76A6NM76 312 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 FOLR1P15328 257 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 SLC35A1P78382 337 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 ILKQ13418 452 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 LAPTM4AQ15012 233 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 SLC48A1Q6P1K1 146 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 ULK3Q6PHR2 472 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 NRMQ8IXM6 262 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 B3GNT7Q8NFL0 401 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 NINJ1Q92982 152 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 MS4A6EQ96DS6 147 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 FAM46AQ96IP4 442 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 HDHD5Q9BXW7 423 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 PALMDQ9NP74 551 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 DAPP1Q9UN19 280 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 SLC22A7Q9Y694 548 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 TMEM14AQ9Y6G1 99 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 TTC3P53804 2025 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 PPP6CO00743 305 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 OR7A17O14581 309 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 SUSD5O60279 629 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 FCGR2AP12318 317 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 RPS5P46782 204 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 POLR2HP52434 150 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 ADNP2Q6IQ32 1131 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 ZCCHC7Q8N3Z6 543 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
LIN54-201ENST00000340417 C9orf43Q8TAL5 461 aaPredicted RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 CADM1Q9BY67 442 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 USP36Q9P275 1121 aaKnown RBP11.96□□□□□ -0.49
LIN54-201ENST00000340417 M0R3H8 397 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 GATBO75879 557 aaKnown RBP11.96□□□□□ -0.5
LIN54-201ENST00000340417 FUT1P19526 365 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.5
LIN54-201ENST00000340417 KCNJ10P78508 379 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 CYP4V2Q6ZWL3 525 aaPredicted RBP11.96□□□□□ -0.5
LIN54-201ENST00000340417 PAQR7Q86WK9 346 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 TM4SF18Q96CE8 201 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 ITPAQ9BY32 194 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 FRS3O43559 492 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 ZNF806P0C7X5 589 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 LTBRP36941 435 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 RAB25P57735 213 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 SLC3A1Q07837 685 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms