RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BADQ92934 168 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 SLC5A10A0PJK1 596 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 PRAMEF27A3QJZ7 478 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
SYNE3-201ENST00000334258 PRR23D1E9PI22 279 aaPredicted RBP12.85□□□□□ -0.35
SYNE3-201ENST00000334258 PLPP1O14494 284 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 HOXA2O43364 376 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 PRR23D2P0DMB1 279 aaPredicted RBP12.85□□□□□ -0.35
SYNE3-201ENST00000334258 AHRP35869 848 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 NUP62P37198 522 aaPredicted RBP12.85□□□□□ -0.35
SYNE3-201ENST00000334258 MMP12P39900 470 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 DGCR2P98153 550 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
SYNE3-201ENST00000334258 SLC8B1Q6J4K2 584 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 RASSF6Q6ZTQ3 369 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 KRT78Q8N1N4 520 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 ZNF527Q8NB42 609 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 POGLUT1Q8NBL1 392 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 ZNF485Q8NCK3 441 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 OR8K3Q8NH51 312 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 PIGXQ8TBF5 258 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 ADAMTS14Q8WXS8 1223 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
SYNE3-201ENST00000334258 GLOD5A6NK44 160 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 TEX46H3BTG2 121 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SOX30O94993 753 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 NPR2P20594 1047 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 PIP5KL1Q5T9C9 394 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 WASH2PQ6VEQ5 465 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CFAP77Q6ZQR2 320 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ACBD7Q8N6N7 88 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 GLYATL1Q969I3 302 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 TM4SF18Q96CE8 201 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 GSDMCQ9BYG8 508 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 NLGN3Q9NZ94 848 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SLC25A13Q9UJS0 675 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CBLCQ9ULV8 474 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SIRT4Q9Y6E7 314 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ZC3H12DA2A288 527 aaKnown RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 NDUFA2O43678 99 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 FGF18O76093 207 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 FGBP02675 491 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CXCL10P02778 98 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SOD2P04179 222 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 IFNA16P05015 189 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 F8A1P23610 371 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 RFX3P48380 749 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 BLVRAP53004 296 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ERVFC1P60507 584 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 TSPAN31Q12999 210 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 LIPIQ6XZB0 460 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ESPNLQ6ZVH7 1005 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 OR52N1Q8NH53 320 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 FGF11Q92914 225 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 DDOQ99489 341 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 FKBP7Q9Y680 259 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 MEIKINA0A087WXM9 373 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 TGM5O43548 720 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CXCL14O95715 111 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ALDOBP05062 364 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 HOXD4P09016 255 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 KELP23276 732 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ACVR1BP36896 505 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 MAPK9P45984 424 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 NTHL1P78549 312 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 GSG1Q2KHT4 349 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 PLBD1Q6P4A8 553 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 OR4Q3Q8NH05 313 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 OSTF1Q92882 214 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 C11orf49Q9H6J7 331 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 EQTNQ9NQ60 294 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 MRPL17Q9NRX2 175 aaKnown RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-201ENST00000334258 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 HCFC2Q9Y5Z7 792 aa12.84□□□□□ -0.35
SYNE3-201ENST00000334258 LRRC72A6NJI9 287 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 RGS11O94810 467 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 VIPR1P32241 457 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms