RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ACSM2AQ08AH3 577 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACSM2BQ68CK6 577 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM173Q86WV6 379 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CMTM1Q8IZ96 169 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAML2Q8IZL2 1156 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MYO19Q96H55 970 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OPALINQ96PE5 141 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 DCLRE1CQ96SD1 692 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC32A1Q9H598 525 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZDHHC4Q9NPG8 344 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GJB4Q9NTQ9 266 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CA14Q9ULX7 337 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 AHCTF1Q8WYP5 2266 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRDCB7Z8K6 153 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR2T1O43869 369 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 FCARP24071 287 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CAPSQ13938 189 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SDHAF4Q5VUM1 108 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLNKQ7Z7G1 428 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF410Q86VK4 478 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 THNSL2Q86YJ6 484 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 AQP12AQ8IXF9 295 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CHST14Q8NCH0 376 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TWIST2Q8WVJ9 160 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 HTR3CQ8WXA8 447 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 WDR89Q96FK6 387 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 P2RY13Q9BPV8 354 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CSNK1G1Q9HCP0 422 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASB6Q9NWX5 421 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC7A11Q9UPY5 501 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GAB2Q9UQC2 676 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A0G2JLW4 131 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5H15A6NDH6 313 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5H1A6NKK0 313 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 NUDT17P0C025 328 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 FOXN2P32314 431 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFSF10P50591 281 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADIGQ0VDE8 80 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 HSPB3Q12988 150 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENPP6Q6UWR7 440 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR56A1Q8NGH5 318 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAMTS16Q8TE57 1224 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRIB2Q92519 343 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 NELL1Q92832 810 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 CELF6Q96J87 481 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZCCHC4Q9H5U6 513 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 MID1IP1Q9NPA3 183 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 SEMA4GQ9NTN9 838 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 MN1Q10571 1320 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 GABRR3A8MPY1 467 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 G3V3Q6 166 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 H0Y980 276 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TCF21O43680 179 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACTL6AO96019 429 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 AREGP15514 252 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 EN2P19622 333 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 EPHB3P54753 998 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 HERV-K104P61576 105 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 GALNT2Q10471 571 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF266Q14584 549 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNAB1Q14722 419 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACSM3Q53FZ2 586 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 GRASPQ7Z6J2 395 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 BEND7Q8N7W2 519 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 FBXO36Q8NEA4 188 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR4K2Q8NGD2 314 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 RPL10LQ96L21 214 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 MECRQ9BV79 373 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OPN3Q9H1Y3 402 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNF24Q9Y225 148 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 COQ4Q9Y3A0 265 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 PCDHA3Q9Y5H8 950 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A1W2PPV4 95 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 H7C1C5 153 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZBTB7BO15156 539 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 SIAH2O43255 324 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 NDST3O95803 873 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 SERPINE2P07093 398 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASGR2P07307 311 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TEAD1P28347 426 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC10A1Q14973 349 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 CELF3Q5SZQ8 465 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 PIWIL3Q7Z3Z3 882 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 C6orf201Q7Z4U5 140 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TSEN2Q8NCE0 465 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR2T35Q8NGX2 323 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 PEBP4Q96S96 227 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 PIGQQ9BRB3 760 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 LIASO43766 372 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAP1O75689 374 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 GCGP01275 180 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 PSPHP78330 225 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 C5orf46Q6UWT4 87 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 BHLHA15Q7RTS1 189 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 CPA6Q8N4T0 437 aa5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 RBM18Q96H35 190 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 TSPAN10Q9H1Z9 355 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC17A7Q9P2U7 560 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms