RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TCEAL4Q96EI5 215 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 ARHGDIGQ99819 225 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 FAIM2Q9BWQ8 316 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 NUBP2Q9Y5Y2 271 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 IRAK3Q9Y616 596 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 COL4A3Q01955 1670 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 CDC42EP2O14613 210 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SNTA1Q13424 505 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SLC36A2Q495M3 483 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 C9orf64Q5T6V5 341 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SLAIN1Q8ND83 568 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 KCTD12Q96CX2 325 aaKnown RBP22.04■■□□□ 1.12
TSKU-201ENST00000333090 SLC23A2Q9UGH3 650 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 ADAM29Q9UKF5 820 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SLC9B1P1A6NJY1 282 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 FZD7O75084 574 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SOX30O94993 753 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 ACRP10323 421 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 UBL4AP11441 157 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 NDUFV2P19404 249 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 SLC3A1Q07837 685 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 NUMA1Q14980 2115 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 PYHIN1Q6K0P9 492 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 OR10H4Q8NGA5 316 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 OR5W2Q8NH69 310 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 CNRIP1Q96F85 164 aaPredicted RBP22.04■■□□□ 1.12
TSKU-201ENST00000333090 MSANTD3Q96H12 275 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 MS4A3Q96HJ5 214 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 LRIG1Q96JA1 1093 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 OR2M2Q96R28 347 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 OR7D2Q96RA2 312 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 TRIM36Q9NQ86 728 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 WNT6Q9Y6F9 365 aa22.04■■□□□ 1.12
TSKU-201ENST00000333090 OR7A10O76100 309 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 NFATC1O95644 943 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 F8A1P23610 371 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 CCR6P51684 374 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 BDH1Q02338 343 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 COL28A1Q2UY09 1125 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 SLC25A35Q3KQZ1 300 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 KLHL12Q53G59 568 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 ARMC5Q96C12 935 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 ZFP3Q96NJ6 502 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 TIMP4Q99727 224 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 CACNG6Q9BXT2 260 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 KLHL31Q9H511 634 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 POLMQ9NP87 494 aaPredicted RBP22.03■■□□□ 1.12
TSKU-201ENST00000333090 GPR34Q9UPC5 381 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 AUP1Q9Y679 476 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 KIAA1549LQ6ZVL6 1849 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 SZT2Q5T011 3432 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 DAPL1A0PJW8 107 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 E9PI62 339 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 J3QRE1 110 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 THY1P04216 161 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 HMGN1P05114 100 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 POLR2CP19387 275 aaPredicted RBP22.03■■□□□ 1.12
TSKU-201ENST00000333090 ITGB8P26012 769 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 CEACAM19Q7Z692 300 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 COMMD7Q86VX2 200 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 AMZ2Q86W34 360 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 SORCS2Q96PQ0 1159 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 MCHR1Q99705 422 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 AICDAQ9GZX7 198 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 RNF208Q9H0X6 261 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 CLEC4MQ9H2X3 399 aaPredicted RBP22.03■■□□□ 1.12
TSKU-201ENST00000333090 UBQLN3Q9H347 655 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 TM7SF3Q9NS93 570 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 PRKAG2Q9UGJ0 569 aa22.03■■□□□ 1.12
TSKU-201ENST00000333090 POU6F2P78424 691 aaPredicted RBP22.02■■□□□ 1.12
TSKU-201ENST00000333090 EXOSC2Q13868 293 aaKnown RBP22.02■■□□□ 1.12
TSKU-201ENST00000333090 DECR1Q16698 335 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 TMEM64Q6YI46 380 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 GDF7Q7Z4P5 450 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 SIAH3Q8IW03 269 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 OR8K5Q8NH50 307 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 OR5K2Q8NHB8 316 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 SLC41A3Q96GZ6 507 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 KLHL28Q9NXS3 571 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 COL4A6Q14031 1691 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 SLC16A1P53985 500 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 ZNF267Q14586 743 aaPredicted RBP22.02■■□□□ 1.12
TSKU-201ENST00000333090 SLC9A5Q14940 896 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 LGALSLQ3ZCW2 172 aaPredicted RBP22.02■■□□□ 1.12
TSKU-201ENST00000333090 C6orf132Q5T0Z8 1188 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 NR4A3Q92570 626 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 CDCP1Q9H5V8 836 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 BEX1Q9HBH7 125 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 TMEM5Q9Y2B1 443 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 ATG4BQ9Y4P1 393 aa22.02■■□□□ 1.12
TSKU-201ENST00000333090 FCMRO60667 390 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 REM1O75628 298 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 MC3RP41968 323 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 CCNJQ5T5M9 372 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 C16orf62Q7Z3J2 963 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
TSKU-201ENST00000333090 JAM3Q9BX67 310 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 ANKRD19PQ9H560 264 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 REV3LO60673 3130 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 LRRK1Q38SD2 2015 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms