RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 NTMQ9P121 344 aa13.44□□□□□ -0.26
TSPO-201ENST00000329563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.44□□□□□ -0.26
TSPO-201ENST00000329563 BOKQ9UMX3 212 aaPredicted RBP13.44□□□□□ -0.26
TSPO-201ENST00000329563 PCDHB14Q9Y5E9 798 aa13.44□□□□□ -0.26
TSPO-201ENST00000329563 SNX8Q9Y5X2 465 aa13.44□□□□□ -0.26
TSPO-201ENST00000329563 NPFFR2Q9Y5X5 522 aa13.44□□□□□ -0.26
TSPO-201ENST00000329563 ABCA4P78363 2273 aa13.44□□□□□ -0.26
TSPO-201ENST00000329563 TRBV5-3A0A0A0MS03 114 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 TRGV5A0A0B4J1U4 118 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ANKRD33BA6NCL7 494 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 CLIC1O00299 241 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 HCN1O60741 890 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 COQ9O75208 318 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 GLI4P10075 376 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 GABRA1P14867 456 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 EFNA1P20827 205 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 ABCD3P28288 659 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 PTPN6P29350 595 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 CHI3L1P36222 383 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 ADH7P40394 386 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 CDKN2CP42773 168 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 MYBPHQ13203 477 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 RUNDC3AQ59EK9 446 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ZNF628Q5EBL2 1059 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 LIX1LQ8IVB5 337 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 DMRTC2Q8IXT2 367 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 TAGAPQ8N103 731 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 OR2L13Q8N349 312 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 OR9A2Q8NGT5 310 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 DIO2Q92813 273 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 SLC7A6OSQ96CW6 309 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 LRRC46Q96FV0 321 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 JSRP1Q96MG2 331 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 SLC35A5Q9BS91 424 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 DOHHQ9BU89 302 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ITPAQ9BY32 194 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ANGPTL4Q9BY76 406 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 CXorf36Q9H7Y0 433 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 SPAG4Q9NPE6 437 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ZCCHC3Q9NUD5 404 aaKnown RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 DDX18Q9NVP1 670 aaKnown RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 VAPAQ9P0L0 249 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 B4GALT7Q9UBV7 327 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 ACAD8Q9UKU7 415 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 PRPF19Q9UMS4 504 aaKnown RBP13.43□□□□□ -0.26
TSPO-201ENST00000329563 FREM3P0C091 2139 aa13.43□□□□□ -0.26
TSPO-201ENST00000329563 A0A0G2JNJ9 132 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 RNF103-CHMP3A0A140T963 221 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 FXYD1O00168 92 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 DNAJA2O60884 412 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 GSNP06396 782 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 HOXB9P17482 250 aaPredicted RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 SOAT1P35610 550 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 CPOXP36551 454 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 CASP3P42574 277 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 EMDP50402 254 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 CDK9P50750 372 aaKnown RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 PSME3P61289 254 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 TESK1Q15569 626 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 SLC25A35Q3KQZ1 300 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 NANOGP8Q6NSW7 305 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 C8orf82Q6P1X6 216 aaPredicted RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 ZCCHC12Q6PEW1 402 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 TMEM107Q6UX40 140 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 DNAJC14Q6Y2X3 702 aaPredicted RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 RINLQ6ZS11 566 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 SEM1Q6ZVN7 128 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 DEFB107AQ8IZN7 70 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 C17orf47Q8NEP4 570 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 ZFP90Q8TF47 636 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 HGDQ93099 445 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 NEURL3Q96EH8 262 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 THUMPD3Q9BV44 507 aaKnown RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 LRMDAQ9H2I8 198 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 UBQLN3Q9H347 655 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 NANOGQ9H9S0 305 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 TPT1P8Q9HAU6 139 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 ACKR4Q9NPB9 350 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 SIRT3Q9NTG7 399 aaPredicted RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 THUMPD1Q9NXG2 353 aaKnown RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 SLC25A37Q9NYZ2 338 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 SLAMF8Q9P0V8 285 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 Q9UFV3 132 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 C19orf53Q9UNZ5 99 aaPredicted RBP13.42□□□□□ -0.26
TSPO-201ENST00000329563 CFL2Q9Y281 166 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
TSPO-201ENST00000329563 TTC36A6NLP5 189 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 UPK1AO00322 258 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 GPX2P18283 190 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 SLC6A2P23975 617 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 PTGDSP41222 190 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 MC3RP41968 323 aa13.41□□□□□ -0.26
TSPO-201ENST00000329563 SLC25A3Q00325 362 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms