RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZAR1Q86SH2 424 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 MBD3L2Q8NHZ7 208 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 TREX2Q9BQ50 279 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 TUBA1CQ9BQE3 449 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 TRIM8Q9BZR9 551 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 ZNF446Q9NWS9 450 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 MED12Q93074 2177 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 UQCRHLA0A096LP55 91 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 PRSS51A0A1B0GVH4 220 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 LINC01387J3KSC0 135 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 SCDO00767 359 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF708P17019 499 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 IGFBP2P18065 325 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 GLYR1Q49A26 553 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 MISPQ8IVT2 679 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 NAXEQ8NCW5 288 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 OR4A15Q8NGL6 344 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 GOT1L1Q8NHS2 421 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 WDR55Q9H6Y2 383 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 AIG1Q9NVV5 245 aa25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF629Q9UEG4 869 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-201ENST00000329231 ALDOCP09972 364 aaKnown RBP25■■□□□ 1.59
ATPAF1-201ENST00000329231 PEPDP12955 493 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 EPHA3P29320 983 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 CLDN18P56856 261 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 DCST2Q5T1A1 773 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 C6orf120Q7Z4R8 191 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 UCN2Q96RP3 112 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 PIGQQ9BRB3 760 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 HOXD1Q9GZZ0 328 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 ITPR2Q14571 2701 aa25■■□□□ 1.59
ATPAF1-201ENST00000329231 NUP214P35658 2090 aaPredicted RBP25■■□□□ 1.59
ATPAF1-201ENST00000329231 GOLGA8QA0A0J9YX86 632 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 A0A1W2PQD3 144 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 GOLGA8OA6NCC3 632 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 DUXAA6NLW8 204 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 E9PBE3 544 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 GOLGA8NF8WBI6 632 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 SCN2BO60939 215 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 POU3F2P20265 443 aaPredicted RBP24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 BMP5P22003 454 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 SSTR2P30874 369 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 S100A3P33764 101 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 SPANXN4Q5MJ08 99 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 ADGRE4PQ86SQ3 457 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF527Q8NB42 609 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 LRRC8CQ8TDW0 803 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 OR7D2Q96RA2 312 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 TM9SF2Q99805 663 aa24.99■■□□□ 1.59
ATPAF1-201ENST00000329231 RNF103-CHMP3A0A140T963 221 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 CLCA1A8K7I4 914 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 MATN1P21941 496 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF136P52737 540 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 DGKQP52824 942 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 NME5P56597 212 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 PHC1P78364 1004 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 FAM174BQ3ZCQ3 159 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 NXNQ6DKJ4 435 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 CHMP1BQ7LBR1 199 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 ANKRD46Q86W74 232 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF295-AS1Q8N0V1 137 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 GATSQ8NAP1 163 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 PIWIL2Q8TC59 973 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 DYDC1Q8WWB3 177 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 WNT2BQ93097 391 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 INTS9Q9NV88 658 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 KCNE3Q9Y6H6 103 aa24.98■■□□□ 1.59
ATPAF1-201ENST00000329231 ADGRG4Q8IZF6 3080 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 A0A087WZY1 265 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 OR2M5A3KFT3 312 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 GMFGO60234 142 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 CPSF4O95639 269 aaKnown RBP24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 UQCRC2P22695 453 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 CTSSP25774 331 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 EEFSECP57772 596 aaKnown RBP24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 UFM1P61960 85 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 DMRTC2Q8IXT2 367 aaPredicted RBP24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 MEIOBQ8N635 442 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 C9orf106Q8NAJ2 232 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 OR5D16Q8NGK9 328 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 C14orf79Q96F83 325 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 LRRC46Q96FV0 321 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 SLC35G5Q96KT7 338 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 ZFP3Q96NJ6 502 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 ZBTB18Q99592 522 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 SLC24A3Q9HC58 644 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 ZNF337Q9Y3M9 751 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 GPR45Q9Y5Y3 372 aa24.97■■□□□ 1.59
ATPAF1-201ENST00000329231 HCFC1P51610 2035 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 INTS1Q8N201 2190 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 AK1P00568 194 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 OPRM1P35372 400 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 RPS26P62854 115 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 FLYWCH1Q4VC44 716 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 ARSKQ6UWY0 536 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 MTERF4Q7Z6M4 381 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 UBQLNLQ8IYU4 475 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 CLEC4FQ8N1N0 589 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 RELL2Q8NC24 303 aaPredicted RBP24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 OR5M1Q8NGP8 315 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms