RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MOAP1Q96BY2 351 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 OR2B2Q9GZK3 357 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM31Q5JXX7 168 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 MFSD9Q8NBP5 474 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 WACQ9BTA9 647 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 YIPF2Q9BWQ6 316 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ENKD1Q9H0I2 346 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 HDHD2Q9H0R4 259 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 RNF121Q9H920 327 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 DZANK1Q9NVP4 752 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 IFI30P13284 250 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 S100A1P23297 94 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ACTR1BP42025 376 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 STAT5AP42229 794 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ACTR1AP61163 376 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 DMPKQ09013 629 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ASAH1Q13510 395 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 AADACL4Q5VUY2 407 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ARL9Q6T311 187 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 VN1R4Q7Z5H5 301 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 ASPGQ86U10 573 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 GJD3Q8N144 294 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 SIRT6Q8N6T7 355 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 OR4K14Q8NGD5 310 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 UBQLN3Q9H347 655 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 FBXO34Q9NWN3 711 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 CLEC4AQ9UMR7 237 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
ATP2C1-201ENST00000328560 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 DUXAA6NLW8 204 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC35G6P0C7Q6 338 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 FPR3P25089 353 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF836Q6ZNA1 936 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 NDEL1Q9GZM8 345 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 BMP7P18075 431 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 NT5EP21589 574 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 MAP2K3P46734 347 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 PPP3R1P63098 170 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF155Q12901 538 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 MAPK14Q16539 360 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF628Q5EBL2 1059 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM27D1Q5T7N8 215 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 CDC73Q6P1J9 531 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 ASB18Q6ZVZ8 466 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 MBOAT2Q6ZWT7 520 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 CYB561A3Q8NBI2 242 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC7A6Q92536 515 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 OR52D1Q9H346 318 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 NPAP1Q9NZP6 1156 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 XIRP2A4UGR9 3374 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 OR6C70A6NIJ9 312 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 PRICKLE3O43900 615 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 RASGRP1O95267 797 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 DECR1Q16698 335 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 OR52L1Q8NGH7 329 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 CHAC2Q8WUX2 184 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 KLHL1Q9NR64 748 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 NLGN3Q9NZ94 848 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 MAT2BQ9NZL9 334 aa13.09□□□□□ -0.31
ATP2C1-201ENST00000328560 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 PEX12O00623 359 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 CHST10O43529 356 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 LAMP2P13473 410 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 PVRP15151 417 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 PRKAR1BP31321 381 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 LBX1P52954 281 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC3A1Q07837 685 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM99Q8N816 258 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 ASCC1Q8N9N2 400 aaKnown RBP13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 MS4A4EQ96PG1 132 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 IFT27Q9BW83 186 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 C1QTNF2Q9BXJ5 285 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 MRPS18AQ9NVS2 196 aaKnown RBP13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC17A4Q9Y2C5 497 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms