RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 E9PI62 339 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OR2A4O95047 310 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 GABRA1P14867 456 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 GJA1P17302 382 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 RAD52P43351 418 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 HOXA1P49639 335 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CCR9P51686 369 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 MAZP56270 477 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 TBPL1P62380 186 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 HSPB3Q12988 150 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CCL14Q16627 93 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PABPC1L2AQ5JQF8 200 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ARL9Q6T311 187 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OR5D16Q8NGK9 328 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OR5W2Q8NH69 310 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SMIM4Q8WVI0 70 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SMPDL3AQ92484 453 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PIGKQ92643 395 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OR2A7Q96R45 310 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SLC38A3Q99624 504 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ALG8Q9BVK2 526 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 KCNK12Q9HB15 430 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 TEX10Q9NXF1 929 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 MRPL15Q9P015 296 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CAMK2AQ9UQM7 478 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 D6RAR5 112 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SIGLEC5O15389 551 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 RP2O75695 350 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SC5DO75845 299 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 GATBO75879 557 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 IGSF6O95976 241 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 C1GALT1C1LP0DN25 315 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ATF1P18846 271 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PSMB1P20618 241 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 OMPP47874 163 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 RAP2BP61225 183 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 LRRC73Q5JTD7 316 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CDC73Q6P1J9 531 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 NAXDQ8IW45 347 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ACBD7Q8N6N7 88 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 TMEM99Q8N816 258 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF740Q8NDX6 193 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ABHD4Q8TB40 342 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 SORCS1Q8WY21 1168 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 EFCAB11Q9BUY7 163 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
CCDC60-201ENST00000327554 NTMQ9P121 344 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 P2RX2Q9UBL9 471 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PPIL1Q9Y3C6 166 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 Q9Y3F1 56 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
CCDC60-201ENST00000327554 PLXNA2O75051 1894 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 CTDSPLO15194 276 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 MID1O15344 667 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 SEPT4O43236 478 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 ADRB1P08588 477 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 CPN1P15169 458 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 GNA13Q14344 377 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PGGHGQ32M88 737 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 FAM69AQ5T7M9 428 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 GLDNQ6ZMI3 551 aaPredicted RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 TMUB2Q71RG4 321 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 MCATQ8IVS2 390 aaKnown RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 OR5T2Q8NGG2 359 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 FERD3LQ96RJ6 166 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 C12orf57Q99622 126 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 HRASLSQ9HDD0 168 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 KLHL1Q9NR64 748 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 MED17Q9NVC6 651 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 FAM183AA6NL82 134 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PGRMC2O15173 223 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 SERPIND1P05546 499 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PPP3CBP16298 524 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 RPL35P42766 123 aaKnown RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 SEC61A1P61619 476 aaKnown RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 SYTL3Q4VX76 610 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 RTN4RL1Q86UN2 441 aaPredicted RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 CPOQ8IVL8 374 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms