RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 NME6O75414 186 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 HPGDP15428 266 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 WT1P19544 449 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 IL12BP29460 328 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 TMED10P49755 219 aaKnown RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 PNLIPRP2P54317 469 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 EFR3AQ14156 821 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 PCOLCEQ15113 449 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF141Q15928 474 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 CCNJQ5T5M9 372 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 AMIGO2Q86SJ2 522 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 HIPK1Q86Z02 1210 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZDHHC13Q8IUH4 622 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF321PQ8N8H1 164 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF441Q8N8Z8 693 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 DIO2Q92813 273 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 NKD1Q969G9 470 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF300Q96RE9 604 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 POLR2J2Q9GZM3 115 aaKnown RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 POLR2J3Q9H1A7 115 aaKnown RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 NXF5Q9H1B4 397 aaKnown RBP16.64■□□□□ 0.25
SYNE4-201ENST00000324444 REEP1Q9H902 201 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 MMP25Q9NPA2 562 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 UBQLN4Q9NRR5 601 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 DTX4Q9Y2E6 619 aa16.64■□□□□ 0.25
SYNE4-201ENST00000324444 TRBV11-1A0A0K0K1C0 115 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 TMEM229AB2RXF0 380 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 H0YJX3 145 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 H3BNH8 94 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 E2F6O75461 281 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 DNAJB5O75953 348 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 HPP00738 406 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 COX6A1P12074 109 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 NR0B1P51843 470 aaKnown RBP16.63■□□□□ 0.25
SYNE4-201ENST00000324444 PLCXD2Q0VAA5 305 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 BTBD16Q32M84 506 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 GRAMD1BQ3KR37 738 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 CARM1Q86X55 608 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 ICA1LQ8NDH6 482 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 SLC22A8Q8TCC7 542 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 IMMP1LQ96LU5 166 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 NDUFAF4Q9P032 175 aa16.63■□□□□ 0.25
SYNE4-201ENST00000324444 COL6A6A6NMZ7 2263 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 HELZ2Q9BYK8 2649 aaKnown RBP16.62■□□□□ 0.25
SYNE4-201ENST00000324444 hCG_2039718K7EN88 272 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 SCDO00767 359 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 AP3D1O14617 1153 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 REM1O75628 298 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 UGT2B17O75795 530 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 NGFRP08138 427 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 DNAJA1P31689 397 aaKnown RBP16.62■□□□□ 0.25
SYNE4-201ENST00000324444 DCTP40126 519 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 RFX3P48380 749 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 HSPA13P48723 471 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 CLK3P49761 638 aaKnown RBP16.62■□□□□ 0.25
SYNE4-201ENST00000324444 VLDLRP98155 873 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 HMBOX1Q6NT76 420 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 KIRREL2Q6UWL6 708 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 ZBTB49Q6ZSB9 765 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 RANBP3LQ86VV4 465 aaPredicted RBP16.62■□□□□ 0.25
SYNE4-201ENST00000324444 VRK2Q86Y07 508 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 GRAMD2AQ8IUY3 354 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF440Q8IYI8 595 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 DND1Q8IYX4 353 aaKnown RBP16.62■□□□□ 0.25
SYNE4-201ENST00000324444 GPR32P1Q8NGA4 272 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 OR11G2Q8NGC1 345 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 OR10Q1Q8NGQ4 319 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 OR5K1Q8NHB7 308 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 ELP5Q8TE02 316 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 C8orf44Q96CB5 159 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 EPYCQ99645 322 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 PIP5K1AQ99755 562 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 ARHGDIGQ99819 225 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 SEMA6AQ9H2E6 1030 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 SLC35A3Q9Y2D2 325 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 DTNAQ9Y4J8 743 aa16.62■□□□□ 0.25
SYNE4-201ENST00000324444 OR6C70A6NIJ9 312 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 G3V2T6 193 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 SOCS6O14544 535 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF23P17027 643 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 OTX2P32243 289 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 ADH7P40394 386 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 EEF1A1P68104 462 aaKnown RBP16.61■□□□□ 0.25
SYNE4-201ENST00000324444 NRF1Q16656 503 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 ZNF550Q7Z398 422 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 PIK3C3Q8NEB9 887 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 OR4N2Q8NGD1 307 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 APOBEC4Q8WW27 367 aaKnown RBP16.61■□□□□ 0.25
SYNE4-201ENST00000324444 TMBIM1Q969X1 311 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 AMBRA1Q9C0C7 1298 aa16.61■□□□□ 0.25
SYNE4-201ENST00000324444 NPIPB9F8W1W9 429 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 FMO6PO60774 539 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 ZIC2O95409 532 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-201ENST00000324444 MT-ND1P03886 318 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 FPR1P21462 350 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 TBXA2RP21731 343 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 PEX2P28328 305 aa16.6■□□□□ 0.25
SYNE4-201ENST00000324444 OR1E2P47887 323 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms