RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMCO5AQ8N6Q1 288 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 GRHL3Q8TE85 626 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC47A1Q96FL8 570 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 HES7Q9BYE0 225 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 METTL7AQ9H8H3 244 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 BCL2L10Q9HD36 194 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 KLHL1Q9NR64 748 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 SAMD4AQ9UPU9 718 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 CHST2Q9Y4C5 530 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 NINQ8N4C6 2090 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 DHRS12A0PJE2 317 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 OR6C70A6NIJ9 312 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 TTC36A6NLP5 189 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 KRT36O76013 467 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 FBXO45P0C2W1 286 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 ETS2P15036 469 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 PNLIPRP2P54317 469 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 ATP12AP54707 1039 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 SELENOWP63302 87 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 H3F3CQ6NXT2 135 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 CCDC80Q76M96 950 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC30A8Q8IWU4 369 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 RELTQ969Z4 430 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF354BQ96LW1 612 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 JSRP1Q96MG2 331 aaPredicted RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 SIGLEC12Q96PQ1 595 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF552Q9H707 407 aaPredicted RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 UBQLN4Q9NRR5 601 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 LRFN1Q9P244 771 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 ITPR1Q14643 2758 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 EML6Q6ZMW3 1958 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 EXPH5Q8NEV8 1989 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 CD247P20963 164 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 PTNP21246 168 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 PSMA4P25789 261 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 CYB561P49447 251 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 LARS2Q15031 903 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 OPN5Q6U736 354 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 CBLN3Q6UW01 205 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 DEF8Q6ZN54 512 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 OR4D11Q8NGI4 311 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 PROX1Q92786 737 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 STMN2Q93045 179 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 KLHDC3Q9BQ90 382 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 DOHHQ9BU89 302 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 SPATA5L1Q9BVQ7 753 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 SAP130Q9H0E3 1048 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 MUC13Q9H3R2 512 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 RPS6KA6Q9UK32 745 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC13A4Q9UKG4 626 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 CARD8Q9Y2G2 431 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 NTNG1Q9Y2I2 539 aa14.12□□□□□ -0.15
PDLIM5-202ENST00000318007 SMG1Q96Q15 3661 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 J3KTA2 159 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 K7ENP7 123 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CSTAP01040 98 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 DBIP07108 87 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PRG2P13727 222 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 NID1P14543 1247 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CD96P40200 585 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TMPRSS3P57727 454 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 AP2B1P63010 937 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 KCNJ10P78508 379 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PLAURQ03405 335 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PPP1R8Q12972 351 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 NTRK2Q16620 822 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF791Q3KP31 576 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TBCELQ5QJ74 424 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 JMJD6Q6NYC1 403 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 INO80CQ6PI98 192 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 EIF3MQ7L2H7 374 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ADGRG5Q8IZF4 528 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 METTL25Q8N6Q8 603 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF527Q8NB42 609 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 POGLUT1Q8NBL1 392 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 LZICQ8WZA0 190 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CNOT9Q92600 299 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 SLCO4A1Q96BD0 722 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TMCO6Q96DC7 493 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PYURFQ96I23 114 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 RHCGQ9UBD6 479 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF232Q9UNY5 417 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 HRH3Q9Y5N1 445 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 CHCHD2Q9Y6H1 151 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TNRC6AQ8NDV7 1962 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PTPRQQ9UMZ3 2332 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 A0A0G2JMM0 328 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 A0A1W2PPB8 328 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 A0A1W2PRS3 328 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 PRAMEF25A6NGN4 478 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 KIR3DP1A8MWS1 328 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 GTPBP1O00178 669 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 OIP5O43482 229 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 NDUFB5O43674 189 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TPST2O60704 377 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 TIPRLO75663 272 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 ANGPTL1O95841 491 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 IFNA14P01570 189 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 RFC3P40938 356 aa14.11□□□□□ -0.15
PDLIM5-202ENST00000318007 KCNJ5P48544 419 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms