RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SMUG1Q53HV7 270 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 SDE2Q6IQ49 451 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 PYHIN1Q6K0P9 492 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 CDC73Q6P1J9 531 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 IL20RBQ6UXL0 311 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 MEPCEQ7L2J0 689 aaKnown RBP17.81■□□□□ 0.44
RTN4-201ENST00000317610 TPRA1Q86W33 373 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 OR11H7Q8NGC8 314 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 GIMAP5Q96F15 307 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 HHIPL1Q96JK4 782 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 TRIM36Q9NQ86 728 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 A0A0G2JK05 382 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 FAM183AA6NL82 134 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 ERI3O43414 337 aaKnown RBP17.81■□□□□ 0.44
RTN4-201ENST00000317610 ZGLP1P0C6A0 271 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 C8orf89P0DMQ9 161 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 ADH5P11766 374 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 STOMP27105 288 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 MC3RP41968 323 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 TRAM1Q15629 374 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 HEPHL1Q6MZM0 1159 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 SFXN4Q6P4A7 337 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 RAB42Q8N4Z0 105 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 SAMD12Q8N8I0 201 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 HSD17B8Q92506 261 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 ZNF681Q96N22 645 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 IL20RAQ9UHF4 553 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 RASD1Q9Y272 281 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 RNF215Q9Y6U7 377 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 GSAPA4D1B5 854 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 SLC22A5O76082 557 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 SOX30O94993 753 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 SLC35G4P0C7Q5 338 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 PAICSP22234 425 aaKnown RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 CLCNKAP51800 687 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 CDK3Q00526 305 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 GALEQ14376 348 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 ELAVL3Q14576 367 aaKnown RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 SLC36A2Q495M3 483 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 CD276Q5ZPR3 534 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 C18orf63Q68DL7 685 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 PLBD1Q6P4A8 553 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 C16orf62Q7Z3J2 963 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 TMEM99Q8N816 258 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 OR8H1Q8NGG4 311 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 OR5W2Q8NH69 310 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 ZNF431Q8TF32 576 aaPredicted RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 ABHD1Q96SE0 405 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 C1QTNF2Q9BXJ5 285 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 ACTRT3Q9BYD9 372 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 DPAGT1Q9H3H5 408 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 EQTNQ9NQ60 294 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 INPP5EQ9NRR6 644 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 NUBP2Q9Y5Y2 271 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 PRRT4C9JH25 899 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 EEF1E1O43324 174 aaKnown RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 PLPP2O43688 288 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 POU3F3P20264 500 aaPredicted RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 MPIP34949 423 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 AHRP35869 848 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 PDX1P52945 283 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 MESP2Q0VG99 397 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 TCEAL5Q5H9L2 206 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 TEX261Q6UWH6 196 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 OR9A2Q8NGT5 310 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 KISS1RQ969F8 398 aaPredicted RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 PHF21AQ96BD5 680 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 OR2M2Q96R28 347 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 TRMT61BQ9BVS5 477 aaKnown RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 EIF3KQ9UBQ5 218 aaKnown RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 ZNF443Q9Y2A4 671 aaPredicted RBP17.8■□□□□ 0.44
RTN4-201ENST00000317610 U3KQ87 197 aa17.8■□□□□ 0.44
RTN4-201ENST00000317610 MDC1Q14676 2089 aaKnown RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 ZSCAN5BA6NJL1 495 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 FCMRO60667 390 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 GNRH1P01148 92 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 STATHP02808 62 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 MLF2Q15773 248 aaPredicted RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 FNDC3BQ53EP0 1204 aaKnown RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 FRRS1Q6ZNA5 592 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 PXKQ7Z7A4 578 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 ZNF655Q8N720 491 aaPredicted RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 OR2L5Q8NG80 312 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 SLC35A4Q96G79 324 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 MACROD1Q9BQ69 325 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 LGR4Q9BXB1 951 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 KRCC1Q9NPI7 259 aaPredicted RBP17.79■□□□□ 0.44
RTN4-201ENST00000317610 NUDT15Q9NV35 164 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 MGAT4AQ9UM21 535 aa17.79■□□□□ 0.44
RTN4-201ENST00000317610 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.78■□□□□ 0.44
RTN4-201ENST00000317610 SC5DO75845 299 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 TPOP07202 933 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ANXA3P12429 323 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 IFI30P13284 250 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 RAB28P51157 221 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 FXYD6P3P58550 94 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ERVK-21P61565 698 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 HSD17B12Q53GQ0 312 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 GET4Q7L5D6 327 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms