RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CADP27708 2225 aa15.65■□□□□ 0.1
EXOSC4-201ENST00000316052 SONP18583 2426 aaKnown RBP15.65■□□□□ 0.1
EXOSC4-201ENST00000316052 TTC36A6NLP5 189 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 ALG1L2C9J202 215 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PDPK1O15530 556 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 KLF4O43474 513 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 AKAP10O43572 662 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PLIN3O60664 434 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 GLRA3O75311 464 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 OXSR1O95747 527 aaPredicted RBP15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 UROSP10746 265 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 ACP2P11117 423 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PRPH2P23942 346 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PSMA4P25789 261 aaKnown RBP15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PRKAG1P54619 331 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 NAA20P61599 178 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 CTU2Q2VPK5 515 aaKnown RBP15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 CFAP157Q5JU67 520 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 PPP4R4Q6NUP7 873 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 Q6ZSR9 355 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 YTHDF3Q7Z739 585 aaKnown RBP15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 GATSQ8NAP1 163 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 OR2T11Q8NH01 316 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 OR10D3Q8NH80 312 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 FAM110BQ8TC76 370 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 METTL2AQ96IZ6 378 aaKnown RBP15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 C1orf109Q9NX04 203 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 NTMQ9P121 344 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 BAIAP2L1Q9UHR4 511 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 COL6A5A8TX70 2615 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 ATRQ13535 2644 aa15.64■□□□□ 0.09
EXOSC4-201ENST00000316052 TRIM64A6NGJ6 449 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 TRIM64BA6NI03 449 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 H3BQF6 201 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 SMAD7O15105 426 aaKnown RBP15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 NDUFB5O43674 189 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 SHBGP04278 402 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 FCGR2AP12318 317 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 CPA3P15088 417 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 IL11P20809 199 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 GPC1P35052 558 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 FIGNL1Q6PIW4 674 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 STAC2Q6ZMT1 411 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 C20orf204Q6ZNR8 217 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 GTPBP8Q8N3Z3 284 aaPredicted RBP15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 CDRT4Q8N9R6 151 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 SLC16A11Q8NCK7 471 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 NUP43Q8NFH3 380 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 OR6K3Q8NGY3 331 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 CEP70Q8NHQ1 597 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 FBXO30Q8TB52 745 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 IGFBPL1Q8WX77 278 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 C16orf58Q96GQ5 468 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 FCRL1Q96LA6 429 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 PRRG4Q9BZD6 226 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 TUBB1Q9H4B7 451 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 REEP4Q9H6H4 257 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 LRTM1Q9HBL6 345 aa15.63■□□□□ 0.09
EXOSC4-201ENST00000316052 RTTNQ86VV8 2226 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 A0A087WZY1 265 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 A0A1W2PRB8 838 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 SLC28A1O00337 649 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 ADAMDEC1O15204 470 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CXCL13O43927 109 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 SS18L1O75177 396 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 KCNK2O95069 426 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 NGFRP08138 427 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 ZNF17P17021 662 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 SDC1P18827 310 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CRHR1P34998 444 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 FRKP42685 505 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 MANFP55145 182 aaKnown RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 SLC18A2Q05940 514 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 DUSP5Q16690 384 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CCDC153Q494R4 210 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 RFTN2Q52LD8 501 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CPTPQ5TA50 214 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 WDR75Q8IWA0 830 aaKnown RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 GSPT2Q8IYD1 628 aaKnown RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CLHC1Q8NHS4 586 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 POC1BQ8TC44 478 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 CAVIN3Q969G5 261 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 OTUB1Q96FW1 271 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 ZNF764Q96H86 408 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 GMPPAQ96IJ6 420 aaPredicted RBP15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 TSSK3Q96PN8 268 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 RHOXF2Q9BQY4 288 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 MED17Q9NVC6 651 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 SH3BP4Q9P0V3 963 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 STOML1Q9UBI4 398 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 EMC9Q9Y3B6 208 aa15.62■□□□□ 0.09
EXOSC4-201ENST00000316052 A0A0J9YW62 118 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 FAM171A2A8MVW0 826 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 TNFSF11O14788 317 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 AZIN1O14977 448 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 TBX19O60806 448 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 PLGP00747 810 aaPredicted RBP15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 PLAUP00749 431 aa15.61■□□□□ 0.09
EXOSC4-201ENST00000316052 EFNA1P20827 205 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms