RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CDC123O75794 336 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SEC24AO95486 1093 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GUCA1CO95843 209 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ITGB6P18564 788 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 IL10P22301 178 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ITGA3P26006 1051 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SLCO1A2P46721 670 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 BRCC3P46736 316 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 OR1G1P47890 313 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CLCN4P51793 760 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FOXG1P55316 489 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GMFBP60983 142 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 HTD2P86397 168 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NME3Q13232 169 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GPR50Q13585 617 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF74Q16587 644 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 DUSP5Q16690 384 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF718Q3SXZ3 478 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LDLRAP1Q5SW96 308 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LYPLAL1Q5VWZ2 237 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SYPL2Q5VXT5 272 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 BSPRYQ5W0U4 402 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TTC19Q6DKK2 380 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SLC27A4Q6P1M0 643 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NEK5Q6P3R8 708 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GDPD4Q6W3E5 623 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM64Q6YI46 380 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 C3orf62Q6ZUJ4 267 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FAM131BQ86XD5 332 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 IQCF2Q8IXL9 164 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 KDM8Q8N371 416 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 RFLNBQ8N5W9 214 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CCDC185Q8N715 623 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 PQLC3Q8N755 202 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 Q8N9P0 234 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GPR148Q8TDV2 347 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TFB1MQ8WVM0 346 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NDRG1Q92597 394 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 MYLPFQ96A32 169 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NTAN1Q96AB6 310 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SLCO4A1Q96BD0 722 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF524Q96C55 264 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 C2orf48Q96LS8 159 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CSPG4P5Q96PW8 444 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LPAR4Q99677 370 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SELENOSQ9BQE4 189 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF556Q9HAH1 456 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NGBQ9NPG2 151 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ABCC13Q9NSE7 274 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TAS2R3Q9NYW6 316 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 HACD3Q9P035 362 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 COX16Q9P0S2 106 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 KCNN3Q9UGI6 736 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FBXL4Q9UKA2 621 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 IKBKGQ9Y6K9 419 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 HHLA1C9JL84 531 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 E7ESA3 106 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GOLGA8MH3BSY2 632 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 P2RY10O00398 339 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TEX28O15482 410 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SYT7O43581 403 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SPAG6O75602 509 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 OR6B1O95007 311 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 PAX1P15863 534 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FUT1P19526 365 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FDFT1P37268 417 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 MAGEA11P43364 429 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 OR3A3P47888 321 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 KCNK10P57789 538 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 DCDC1P59894 354 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 HERV-K104P63124 156 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CDK16Q00536 496 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ELAVL2Q12926 359 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 GAMTQ14353 236 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 KLHL38Q2WGJ6 581 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LGSNQ5TDP6 509 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CD300LGQ6UXG3 332 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 CCBE1Q6UXH8 406 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 BNIPLQ7Z465 357 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LACC1Q8IV20 430 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ARHGAP18Q8N392 663 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TEX26Q8N6G2 289 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SIDT2Q8NBJ9 832 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ADAD2Q8NCV1 583 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FBXO36Q8NEA4 188 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 RNF139Q8WU17 664 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 DYDC1Q8WWB3 177 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 HTR3CQ8WXA8 447 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC39Q96DD0 335 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 MARK4Q96L34 752 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NSMCE2Q96MF7 247 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FAM210AQ96ND0 272 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TSGA13Q96PP4 275 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 TAAR6Q96RI8 345 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms