RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SLC7A7Q9UM01 511 aa11.56□□□□□ -0.56
RNF4-201ENST00000314289 ARRDC5A6NEK1 342 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DUXAA6NLW8 204 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 AP3D1O14617 1153 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 HYAL3O43820 417 aaPredicted RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 APOA1P02647 267 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 MAOAP21397 527 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 PGDP52209 483 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 SMIM11AP58511 58 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DCST2Q5T1A1 773 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 SLC30A6Q6NXT4 461 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 SLC34A3Q8N130 599 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 OR8D4Q8NGM9 314 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DIO2Q92813 273 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 CLIP3Q96DZ5 547 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 KCNS3Q9BQ31 491 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 CENPOQ9BU64 300 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 TWSG1Q9GZX9 223 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 PLCXD1Q9NUJ7 323 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 C19orf53Q9UNZ5 99 aaPredicted RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 DTX4Q9Y2E6 619 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 TMEM184BQ9Y519 407 aaPredicted RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 ZDBF2Q9HCK1 2354 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 IGHV5-51A0A0C4DH38 117 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 METTL12A8MUP2 240 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 CSF2P04141 144 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DCNP07585 359 aaKnown RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 BCKDHBP21953 392 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 GIPRP48546 466 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DEFA1P59665 94 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 DEFA3P59666 94 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 RACK1P63244 317 aaKnown RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 ZNF155Q12901 538 aaPredicted RBP11.55□□□□□ -0.56
RNF4-201ENST00000314289 SNAPC1Q16533 368 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 AMZ1Q400G9 498 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 FHL5Q5TD97 284 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 SLX4IPQ5VYV7 408 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 HEPHL1Q6MZM0 1159 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 PEX5LQ8IYB4 626 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 OR8H2Q8N162 312 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 OTULINQ96BN8 352 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 LRR1Q96L50 414 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 LYRM4Q9HD34 91 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 FKBP14Q9NWM8 211 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 KLHL28Q9NXS3 571 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 CARD8Q9Y2G2 431 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 PCDHGB6Q9Y5F9 930 aa11.55□□□□□ -0.56
RNF4-201ENST00000314289 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 ZNF217O75362 1048 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 PROS1P07225 676 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 SOX3P41225 446 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 OR2B6P58173 313 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 DUSP8Q13202 625 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 TBCEQ15813 527 aaPredicted RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 SPANXN2Q5MJ10 180 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 GDF7Q7Z4P5 450 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ZFPM2Q8WW38 1151 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ARHGDIGQ99819 225 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 N6AMT1Q9Y5N5 214 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 WWP2O00308 870 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ATP1B1P05026 303 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 GNSP15586 552 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 CD27P26842 260 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 CSNK2BP67870 215 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 MGAT2Q10469 447 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ELOCQ15369 112 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 TSTQ16762 297 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 ATAD3CQ5T2N8 411 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 AGAP6Q5VW22 663 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 C1orf94Q6P1W5 598 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 TUBA3EQ6PEY2 450 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 B3GLCTQ6Y288 498 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 MMABQ96EY8 250 aaPredicted RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 SLC41A3Q96GZ6 507 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 CEP19Q96LK0 163 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 AGAP4Q96P64 663 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 TSSK6Q9BXA6 273 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 PTGFRNQ9P2B2 879 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ENOPH1Q9UHY7 261 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 UGT2A1Q9Y4X1 527 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 LRRTM2O43300 516 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 FOXS1O43638 330 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 NME1P15531 152 aaKnown RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 ZNF45Q02386 682 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ZNF91Q05481 1191 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 STX4Q12846 297 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 ARHGAP11BQ3KRB8 267 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 NXNL2Q5VZ03 156 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 VWA5B2Q8N398 1253 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 GRHL3Q8TE85 626 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 SPRTNQ9H040 489 aaPredicted RBP11.54□□□□□ -0.56
RNF4-201ENST00000314289 PIGUQ9H490 435 aa11.54□□□□□ -0.56
RNF4-201ENST00000314289 CALML5Q9NZT1 146 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms