RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TBXA2RP21731 343 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 PRKAR1BP31321 381 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 IFNA8P32881 189 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 RFX3P48380 749 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 RAB25P57735 213 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 PPP2CBP62714 309 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 PPP2CAP67775 309 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 GPM6BQ13491 265 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 DSG2Q14126 1118 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 CCDC85BQ15834 202 aaPredicted RBP23.61■■□□□ 1.37
HOXB3-201ENST00000311626 KLHL12Q53G59 568 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 FAM27D1Q5T7N8 215 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 CD200R1LQ6Q8B3 271 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 NR2C2APQ86WQ0 139 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 AP3S1Q92572 193 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 RFKQ969G6 155 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 TSACCQ96A04 125 aaPredicted RBP23.61■■□□□ 1.37
HOXB3-201ENST00000311626 TMEM246Q9BRR3 403 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 C1QTNF2Q9BXJ5 285 aa23.61■■□□□ 1.37
HOXB3-201ENST00000311626 PEX12O00623 359 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 EIF2S1P05198 315 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 MRPL3P09001 348 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 MAKP20794 623 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 FGF9P31371 208 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 SLC16A1P53985 500 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 RPS21P63220 83 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 ABATP80404 500 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 LCN1P1Q5VSP4 162 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 TRIQKQ629K1 86 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 FBXO42Q6P3S6 717 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 CXXC5Q7LFL8 322 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 PRSS41Q7RTY9 318 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 LRRC25Q8N386 305 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 NLKQ9UBE8 527 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 VCANP13611 3396 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 KNL1Q8NG31 2342 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 IRGMA1A4Y4 181 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 KLF4O43474 513 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 NDUFV2P19404 249 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 Q5BKY6 102 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 TMEM31Q5JXX7 168 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 EOGTQ5NDL2 527 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 ZNF322Q6U7Q0 402 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 YAF2Q8IY57 180 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 C19orf18Q8NEA5 215 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 OR2T33Q8NG76 320 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 PPIL3Q9H2H8 161 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 PPP1R3EQ9H7J1 279 aa23.6■■□□□ 1.37
HOXB3-201ENST00000311626 MRPS2Q9Y399 296 aaKnown RBP23.6■■□□□ 1.37
HOXB3-201ENST00000311626 C12orf71A8MTZ7 269 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 APODP05090 189 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 FXYD6P3P58550 94 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 PAQR7Q86WK9 346 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 OR10G6Q8NH81 332 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 CALML5Q9NZT1 146 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 PTGFRNQ9P2B2 879 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 FAM25AB3EWG3 89 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 FAM25CB3EWG5 89 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 FAM25GB3EWG6 89 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 CTSVO60911 334 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 HTR2AP28223 471 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 GDI1P31150 447 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 ZNF136P52737 540 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 QPRTQ15274 297 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 PRAMEF8Q5VWM4 474 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 PRAMEF7Q5VXH5 474 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 FIGNL1Q6PIW4 674 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 ENPP7Q6UWV6 458 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 ASPGQ86U10 573 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 PEX5LQ8IYB4 626 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 SRFBP1Q8NEF9 429 aaKnown RBP23.59■■□□□ 1.37
HOXB3-201ENST00000311626 TTTY10Q9BZA0 68 aa23.59■■□□□ 1.37
HOXB3-201ENST00000311626 LOC105369274A0A096LPK9 316 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 LOC102723532A0A0G2JNH3 316 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 PRR19A6NJB7 356 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 GPR89AB7ZAQ6 455 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 GPR89BP0CG08 455 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 HTR1FP30939 366 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 PPP3R1P63098 170 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 IDNKQ5T6J7 187 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 ZC3H14Q6PJT7 736 aaKnown RBP23.58■■□□□ 1.37
HOXB3-201ENST00000311626 OR4N4Q8N0Y3 316 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 OR52D1Q9H346 318 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 ISYNA1Q9NPH2 558 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 ZNF624Q9P2J8 865 aaPredicted RBP23.58■■□□□ 1.37
HOXB3-201ENST00000311626 CDH10Q9Y6N8 788 aa23.58■■□□□ 1.37
HOXB3-201ENST00000311626 LRRC72A6NJI9 287 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 RGS13O14921 159 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 AKAP8O43823 692 aaKnown RBP23.58■■□□□ 1.36
HOXB3-201ENST00000311626 ADH1BP00325 375 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 CHRNB1P11230 501 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 HEPHL1Q6MZM0 1159 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 C7orf57Q8NEG2 295 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 OR1E3Q8WZA6 343 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 MS4A4EQ96PG1 132 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 SDF2Q99470 211 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 PRSS27Q9BQR3 290 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 MTHFD2LQ9H903 347 aaPredicted RBP23.58■■□□□ 1.36
HOXB3-201ENST00000311626 KCMF1Q9P0J7 381 aa23.58■■□□□ 1.36
HOXB3-201ENST00000311626 PRKAG2Q9UGJ0 569 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms