RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 PRAMEF2O60811 474 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 IGHEP01854 428 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 PORP16435 677 aaPredicted RBP12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 TBPL1P62380 186 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 EVX2Q03828 476 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 PPP1R3AQ16821 1122 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 ZNF648Q5T619 568 aaPredicted RBP12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 HEPHL1Q6MZM0 1159 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 BRICD5Q6PL45 260 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 TOMM40LQ969M1 308 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 VDAC3Q9Y277 283 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 ACTL7AQ9Y615 435 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 KNTC1P50748 2209 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 DEFB133Q30KQ1 61 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 KCTD20Q7Z5Y7 419 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 DOK4Q8TEW6 326 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 PSMF1Q92530 271 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 NUDT9Q9BW91 350 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 NPIPA5A0A0B4J1W7 369 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 NPIPA7E9PJI5 369 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 TSTD3H0UI37 97 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 SPDEFO95238 335 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 NPIPA8P0DM63 369 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 CPT2P23786 658 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 NFATC4Q14934 902 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 PAFAH1B3Q15102 231 aaKnown RBP12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 AGAP7PQ5VUJ5 663 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 AGAP6Q5VW22 663 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 AGAP4Q96P64 663 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 LRIT1Q9P2V4 623 aa12.19□□□□□ -0.46
SPTBN2-201ENST00000309996 ARHGEF28Q8N1W1 1705 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ASCC3Q8N3C0 2202 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 TRBV11-1A0A0K0K1C0 115 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PMM2O15305 246 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 AK1P00568 194 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 IL2RGP31785 369 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ADARB1P78563 741 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC23A2Q9UGH3 650 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC31A2O15432 143 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SNAP29O95721 258 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 VIPR2P41587 438 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 RPL35P42766 123 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC2A11Q9BYW1 496 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 FZD8Q9H461 694 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC39A9Q9NUM3 307 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ANKRD54Q6NXT1 300 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ESPNLQ6ZVH7 1005 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SNAPC3Q92966 411 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 KCNK12Q9HB15 430 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PEX10O60683 326 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PIGFQ07326 219 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 CNN3Q15417 329 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 C14orf28Q4W4Y0 310 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 C12orf76Q8N812 135 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 FAM83FQ8NEG4 500 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PIGCQ92535 297 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ZNF395Q9H8N7 513 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 DNAJB5O75953 348 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 PROS1P07225 676 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC18A1P54219 525 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 RAB11AP62491 216 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SFRP4Q6FHJ7 346 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 UBL7Q96S82 380 aaPredicted RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 KCTD3Q9Y597 815 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 HPRP00739 348 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 KCNAB2Q13303 367 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 HES5Q5TA89 166 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 SCML4Q8N228 414 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 ATG4BQ9Y4P1 393 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 NME7Q9Y5B8 376 aa12.18□□□□□ -0.46
SPTBN2-201ENST00000309996 DRD1P21728 446 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 C5AR1P21730 350 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 MTNR1AP48039 350 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 CTXN1P60606 82 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 CDKN3Q16667 212 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 CLEC4DQ8WXI8 215 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 HOXD1Q9GZZ0 328 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 PREBQ9HCU5 417 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 SPHK2Q9NRA0 654 aa12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 VSX1Q9NZR4 365 aaPredicted RBP12.17□□□□□ -0.46
SPTBN2-201ENST00000309996 RHBDD3Q9Y3P4 386 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms