RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SLC9A6Q92581 669 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 OSTF1Q92882 214 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 GCDHQ92947 438 aaPredicted RBP10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TM4SF18Q96CE8 201 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ERP27Q96DN0 273 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 GPR22Q99680 433 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 NPAS1Q99742 590 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TBL1XR1Q9BZK7 514 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TAS2R9Q9NYW1 312 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 UTS2RQ9UKP6 389 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 FKBP7Q9Y680 259 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 PMF1-BGLAPU3KQ54 211 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TMEM89A2RUT3 159 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 SMAD9O15198 467 aaKnown RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 ANGPTL1O95841 491 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 LTA4HP09960 611 aaKnown RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 MTHFD2P13995 350 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF23P17027 643 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 ME2P23368 584 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 PTAFRP25105 342 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 PSMA4P25789 261 aaKnown RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CARD18P57730 90 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CHRNB3Q05901 458 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF155Q12901 538 aaPredicted RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 DLG1Q12959 904 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CSTF3Q12996 717 aaKnown RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 MORF4L2Q15014 288 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CARTPTQ16568 116 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 DECR1Q16698 335 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 GOLGA7Q7Z5G4 137 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 GTPBP8Q8N3Z3 284 aaPredicted RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 TRIM58Q8NG06 486 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 KCTD4Q8WVF5 259 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CPNE4Q96A23 557 aaPredicted RBP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 MTBPQ96DY7 904 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 KLHL15Q96M94 604 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 RNF145Q96MT1 663 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 FOXN4Q96NZ1 517 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 CDK15Q96Q40 435 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 FAIM2Q9BWQ8 316 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 NMRAL1Q9HBL8 299 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 GP6Q9HCN6 339 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 TXNDC16Q9P2K2 825 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 PRSS50Q9UI38 385 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 ACOT9Q9Y305 439 aa10.43□□□□□ -0.74
SMIM4-201ENST00000307106 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMIM4-201ENST00000307106 A0A087WZY1 265 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 LOC390937A0A1W2PQ73 354 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 FAM157AC9JC47 383 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 CLDN9O95484 217 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 ESRRBO95718 433 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 YES1P07947 543 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 GFAPP14136 432 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 GGT1P19440 569 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 CD40P25942 277 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 RFX3P48380 749 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF83P51522 516 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 GALNT1Q10472 559 aaPredicted RBP10.42□□□□□ -0.74
SMIM4-201ENST00000307106 FASTKD3Q14CZ7 662 aaKnown RBP10.42□□□□□ -0.74
SMIM4-201ENST00000307106 PFKFB4Q16877 469 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 CYP27C1Q4G0S4 372 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 FRG2Q64ET8 278 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 TTC19Q6DKK2 380 aaPredicted RBP10.42□□□□□ -0.74
SMIM4-201ENST00000307106 RAPH1Q70E73 1250 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 P2RY8Q86VZ1 359 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 FBXO36Q8NEA4 188 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 OR7G2Q8NG99 324 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 ZBTB8AQ96BR9 441 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 FRG2BQ96QU4 278 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 RBBP8Q99708 897 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 INPP5KQ9BT40 448 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 TRMOQ9BU70 441 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 SRXN1Q9BYN0 137 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 SENP1Q9P0U3 644 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 SLC12A4Q9UP95 1085 aa10.42□□□□□ -0.74
SMIM4-201ENST00000307106 C7orf72A4D263 438 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 LRP5LA4QPB2 252 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 OR5H1A6NKK0 313 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 CXorf49A8MYA2 514 aaPredicted RBP10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PLOD3O60568 738 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PRKD3O94806 890 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PGM3O95394 542 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 IL33O95760 270 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 COX5AP20674 150 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 IGHV1-2P23083 117 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 IVDP26440 423 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 SFTPDP35247 375 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 OR3A2P47893 321 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 ALDH18A1P54886 795 aaKnown RBP10.41□□□□□ -0.74
SMIM4-201ENST00000307106 ARL4CP56559 192 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PRR5P85299 388 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PDIA2Q13087 525 aaKnown RBP10.41□□□□□ -0.74
SMIM4-201ENST00000307106 PLPPR5Q32ZL2 321 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 KLHL17Q6TDP4 642 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 APOOLQ6UXV4 268 aa10.41□□□□□ -0.74
SMIM4-201ENST00000307106 RINLQ6ZS11 566 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms