RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TMEM138Q9NPI0 162 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ZNF69Q9UC07 566 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SLC13A4Q9UKG4 626 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 NINQ8N4C6 2090 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 UBE2QL1A1L167 161 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ARPC5O15511 151 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PRPS1L1P21108 318 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ZP2Q05996 745 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.774e-9■□□□□ 9.4
LSM3-201ENST00000306024 SLC25A25Q6KCM7 469 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 BCDIN3DQ7Z5W3 292 aaKnown RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 CCDC36Q8IYA8 594 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TMEFF1Q8IYR6 380 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 C10orf111Q8N326 155 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TM9SF4Q92544 642 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PTP4A1Q93096 173 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 UCN3Q969E3 161 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TCEAL3Q969E4 200 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 C19orf43Q9BQ61 176 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GULP1Q9UBP9 304 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PLAGL1Q9UM63 463 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TMEM5Q9Y2B1 443 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ANKRD36A6QL64 1941 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SPAG17Q6Q759 2223 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TPST2O60704 377 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 MPC1LP0DKB6 136 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 CHMP24386 653 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 STAT5AP42229 794 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TAS2R38P59533 333 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PSMA6P60900 246 aaKnown RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 B4GALNT1Q00973 533 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 CHIT1Q13231 466 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 KIAA0895LQ68EN5 471 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 AGTRAPQ6RW13 159 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ADAMTSL4Q6UY14 1074 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ZNF730Q6ZMV8 503 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SHFQ7M4L6 423 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ATCAYQ86WG3 371 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 OOSP2Q86WS3 158 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SPEM1Q8N4L4 309 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GIMAP1Q8WWP7 306 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 KATNB1Q9BVA0 655 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 LGR4Q9BXB1 951 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 ANGPT4Q9Y264 503 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SNX11Q9Y5W9 270 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 COLEC10Q9Y6Z7 277 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 DENND4CQ5VZ89 1909 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 CHD5Q8TDI0 1954 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TRBC2A0A5B9 178 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 TMEM202A6NGA9 273 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 CD3GP09693 182 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 ACPPP15309 386 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 TACR1P25103 407 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 MC2RQ01718 297 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 SCARB2Q14108 478 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 TCTE1Q5JU00 501 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 CD276Q5ZPR3 534 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 NLRC3Q7RTR2 1065 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 VRK3Q8IV63 474 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 OR8J1Q8NGP2 316 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 NFKBIDQ8NI38 313 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 LCN9Q8WX39 176 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 GEMIN6Q8WXD5 167 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 EXO1Q9UQ84 846 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 OARD1Q9Y530 152 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 PCDHGA9Q9Y5G4 932 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 NUBP2Q9Y5Y2 271 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 PIKFYVEQ9Y2I7 2098 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 J3KTA2 159 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 KCNK5O95279 499 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 TSPAN12O95859 305 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 SDHBP21912 280 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 HK3P52790 923 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 RIN1Q13671 783 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 METAP1DQ6UB28 335 aaPredicted RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 IL20RBQ6UXL0 311 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 C17orf64Q86WR6 236 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 BOLLQ8N9W6 283 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 NANPQ8TBE9 248 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 LRRC46Q96FV0 321 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 OR51B5Q9H339 312 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 SLC32A1Q9H598 525 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 GPR34Q9UPC5 381 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 PCDHGA2Q9Y5H1 932 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 TCRBV16S1A1N1A0A5B0 115 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 KHDRBS3O75525 346 aaKnown RBP10.22□□□□□ -0.77
LSM3-201ENST00000306024 CBX7O95931 251 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 AMD1P17707 334 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 ACADLP28330 430 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 IGFALSP35858 605 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 CRYBB2P43320 205 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 RABIFP47224 123 aa10.22□□□□□ -0.77
LSM3-201ENST00000306024 S100A12P80511 92 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms