RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 TEKT2Q9UIF3 430 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 TPRP12270 2363 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 EML6Q6ZMW3 1958 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 MAP1BP46821 2468 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 A0A1W2PQD3 144 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 PINLYPA6NC86 204 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 ANKRD33BA6NCL7 494 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 C2orf72A6NCS6 295 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 OR5H15A6NDH6 313 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 TPST2O60704 377 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SEMA7AO75326 666 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 WISP1O95388 367 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 OPN1SWP03999 348 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 PABPC4LP0CB38 370 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 NQO1P15559 274 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 IL12BP29460 328 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 EVI2BP34910 448 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 KCNJ5P48544 419 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 CYB561P49447 251 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 TNFSF10P50591 281 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 FOXO1Q12778 655 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 TRAP1Q12931 704 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 BNIP2Q12982 314 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 EFR3AQ14156 821 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 FGFBP1Q14512 234 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 COL28A1Q2UY09 1125 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 C19orf48Q6RUI8 117 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 CBLL1Q75N03 491 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 TSPYL5Q86VY4 417 aaPredicted RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 LSRQ86X29 649 aaPredicted RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 SPPL2CQ8IUH8 684 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SLC30A8Q8IWU4 369 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 GPALPP1Q8IXQ4 340 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 DND1Q8IYX4 353 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 CYP4Z2PQ8N1L4 340 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 RBMXL3Q8N7X1 1067 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 WDSUB1Q8N9V3 476 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SMYD1Q8NB12 490 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 GOLM1Q8NBJ4 401 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 FAM13CQ8NE31 585 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 FAM71CQ8NEG0 241 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 OR52P1PQ8NH57 321 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SLC39A7Q92504 469 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 FIG4Q92562 907 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 CCDC124Q96CT7 223 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 ARSGQ96EG1 525 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SCMH1Q96GD3 660 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SGCZQ96LD1 299 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SECISBP2Q96T21 854 aaKnown RBP8.68□□□□□ -1.02
RFX3-201ENST00000302303 ANGPTL4Q9BY76 406 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 HPF1Q9NWY4 346 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 CALML5Q9NZT1 146 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 LRFN1Q9P244 771 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 DTNAQ9Y4J8 743 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 SNX13Q9Y5W8 968 aa8.68□□□□□ -1.02
RFX3-201ENST00000302303 CDHR4A6H8M9 788 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 SERINC4A6NH21 518 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 TRIM3O75382 744 aaPredicted RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 SEMG1P04279 462 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 THBS1P07996 1170 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 FAM87AP0C7U9 286 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 NID1P14543 1247 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 ATP6V1C1P21283 382 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 FUT4P22083 530 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 TMED10P49755 219 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 PSMD4P55036 377 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 SELENOWP63302 87 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 KCNJ10P78508 379 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 CCNIQ14094 377 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 GNA13Q14344 377 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 OR1C1Q15619 314 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 NDUFAF6Q330K2 333 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 PRAMEF20Q5VT98 475 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 SLC22A10Q63ZE4 541 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 DHRS4L2Q6PKH6 230 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 CBLN3Q6UW01 205 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 CYP2R1Q6VVX0 501 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 ZNF836Q6ZNA1 936 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 PATL1Q86TB9 770 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 LACC1Q8IV20 430 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 PSD4Q8NDX1 1056 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 CNOT9Q92600 299 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 UTP23Q9BRU9 249 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 HOXD1Q9GZZ0 328 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 PCNX3Q9H6A9 2034 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 OLAHQ9NV23 265 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 MRTO4Q9UKD2 239 aaKnown RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 ANGPT4Q9Y264 503 aa8.67□□□□□ -1.02
RFX3-201ENST00000302303 ZNF443Q9Y2A4 671 aaPredicted RBP8.67□□□□□ -1.02
RFX3-201ENST00000302303 IGLV3-32A0A0A0MS00 114 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 TCRBV3S1A0A5B6 114 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 C5orf58C9J3I9 102 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 G3V3Y1 287 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 WISP2O76076 250 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ANGPTL1O95841 491 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 LGI1O95970 557 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 SERPINA1P01009 418 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms