RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 GREM1O60565 184 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 CHRM4P08173 479 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
ZNF558-201ENST00000301475 PTNP21246 168 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 CD70P32970 193 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 BUD31P41223 144 aaPredicted RBP10.17□□□□□ -0.78
ZNF558-201ENST00000301475 FUT5Q11128 374 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 LMAN2Q12907 356 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 SNTB2Q13425 540 aaKnown RBP10.17□□□□□ -0.78
ZNF558-201ENST00000301475 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 LRRTM4Q86VH4 590 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 BVESQ8NE79 360 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 C17orf47Q8NEP4 570 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 EXOSC8Q96B26 276 aaKnown RBP10.17□□□□□ -0.78
ZNF558-201ENST00000301475 SEC22CQ9BRL7 303 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 GSDMCQ9BYG8 508 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 ZDHHC6Q9H6R6 413 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 NEUROD4Q9HD90 331 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 BABAM2Q9NXR7 383 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 COPS3Q9UNS2 423 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 ENTPD4Q9Y227 616 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 PPIL1Q9Y3C6 166 aa10.17□□□□□ -0.78
ZNF558-201ENST00000301475 MYOFQ9NZM1 2061 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 SLC5A10A0PJK1 596 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 L7N2F9 121 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 NR2F1P10589 423 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 XPAP23025 273 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 GDNFP39905 211 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 GPR4P46093 362 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 OMPP47874 163 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 ERVK-21P61565 698 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 Q6ZVL8 140 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 HSD11B1LQ7Z5J1 315 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 SLC9B2Q86UD5 537 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 OR13C5Q8NGS8 318 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 GNPDA2Q8TDQ7 276 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 CD93Q9NPY3 652 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 NPDC1Q9NQX5 325 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 MGAT4CQ9UBM8 478 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 GPR160Q9UJ42 338 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 PLXNA2O75051 1894 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 LRRN3E7EW58 273 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 PDCD5O14737 125 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 CTSAP10619 480 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 ATF1P18846 271 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 PCBP4P57723 403 aaKnown RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 RPS7P62081 194 aaKnown RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 BDH1Q02338 343 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 PGGHGQ32M88 737 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 PIP5KL1Q5T9C9 394 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 OR5M10Q6IEU7 315 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 FAM83HQ6ZRV2 1179 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 SLC24A5Q71RS6 500 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 DNAJB7Q7Z6W7 309 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 CPOQ8IVL8 374 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 RASGEF1AQ8N9B8 481 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 LCORQ96JN0 433 aaPredicted RBP10.16□□□□□ -0.78
ZNF558-201ENST00000301475 DPH7Q9BTV6 452 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 OR10A4Q9H209 315 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 LRRN3Q9H3W5 708 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 MED20Q9H944 212 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 TRPC4Q9UBN4 977 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 DYRK1BQ9Y463 629 aa10.16□□□□□ -0.78
ZNF558-201ENST00000301475 DNASE2O00115 360 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 HYAL3O43820 417 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 B3GALNT1O75752 331 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 C1orf105O95561 183 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 EOMESO95936 686 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ADRB1P08588 477 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 CCR8P51685 355 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 TAS2R41P59536 307 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ERVFC1P60507 584 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 STXBP1P61764 594 aaKnown RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SLC3A1Q07837 685 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 COL9A2Q14055 689 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 RPTNQ6XPR3 784 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 GET4Q7L5D6 327 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 OR5W2Q8NH69 310 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SLC5A11Q8WWX8 675 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 TM4SF18Q96CE8 201 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 NPAS1Q99742 590 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 JAM3Q9BX67 310 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SGPP1Q9BX95 441 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ACTR6Q9GZN1 396 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 WDR26Q9H7D7 661 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 GLS2Q9UI32 602 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 GMEB2Q9UKD1 530 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 RCE1Q9Y256 329 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 CA5BQ9Y2D0 317 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 GPR55Q9Y2T6 319 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 PRELID3BQ9Y3B1 194 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 BACE2Q9Y5Z0 518 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 CARNS1A5YM72 827 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 OR6C65A6NJZ3 312 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 CPSF4LA6NMK7 179 aaKnown RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ANXA2P2A6NMY6 339 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms