RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 IFNGR2P38484 337 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 E2F1Q01094 437 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TLE2Q04725 743 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 HSPB3Q12988 150 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 CDC73Q6P1J9 531 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 RTN4RL1Q86UN2 441 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 THAP4Q8WY91 577 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 CNOT9Q92600 299 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ATOH1Q92858 354 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 PPP1R16AQ96I34 528 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 CHIAQ9BZP6 476 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 WDR26Q9H7D7 661 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 CA5BQ9Y2D0 317 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 DYRK1BQ9Y463 629 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 BACE2Q9Y5Z0 518 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TCRBV16S1A1N1A0A5B0 115 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ABCD4O14678 606 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 PDCD5O14737 125 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 CTDSPLO15194 276 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TSPAN6O43657 245 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 SELENOFO60613 162 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 GIPP09681 153 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TBXA2RP21731 343 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ATP5A1P25705 553 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 FRKP42685 505 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 OMPP47874 163 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 PCBP4P57723 403 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 MEF2AQ02078 507 aaPredicted RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 METTL11BQ5VVY1 283 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 HIST2H2AA3Q6FI13 130 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 FAM46AQ96IP4 442 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 NPAS1Q99742 590 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ALG8Q9BVK2 526 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 ABCG4Q9H172 646 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TRIM36Q9NQ86 728 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 NANSQ9NR45 359 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 HPF1Q9NWY4 346 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 FLVCR2Q9UPI3 526 aa12.62□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SOCS6O14544 535 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 GALR3O60755 368 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SC5DO75845 299 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SERPIND1P05546 499 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 NFYAP23511 347 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 MLLT1Q03111 559 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 GPR68Q15743 365 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 PGGHGQ32M88 737 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 ACBD7Q8N6N7 88 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 COQ8AQ8NI60 647 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OSTF1Q92882 214 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 RGMAQ96B86 450 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 ART5Q96L15 291 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 DPH7Q9BTV6 452 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OR51I1Q9H343 314 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SUV39H2Q9H5I1 410 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 CA10Q9NS85 328 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 NKIRAS2Q9NYR9 191 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 CFAP97Q9P2B7 532 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 MGAT4CQ9UBM8 478 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 PLXND1Q9Y4D7 1925 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 POM121CA8CG34 1229 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 LATS1O95835 1130 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 APOC1P02654 83 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 CPN1P15169 458 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 GDNFP39905 211 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 VEGFCP49767 419 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 CCR8P51685 355 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 HLXQ14774 488 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 TRAM1Q15629 374 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SFRP5Q5T4F7 317 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 FAM69AQ5T7M9 428 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 BAIAP2L2Q6UXY1 529 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OLIG3Q7RTU3 272 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 NAXDQ8IW45 347 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 OR5W2Q8NH69 310 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SCAMP4Q969E2 229 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 PARK7Q99497 189 aaKnown RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 SGPP1Q9BX95 441 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 HINT3Q9NQE9 182 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms