RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ACTA1P68133 377 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SHC2P98077 582 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 QPRTQ15274 297 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 LTB4RQ15722 352 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 DUSP5Q16690 384 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ZFP69Q49AA0 526 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CLEC12AQ5QGZ9 265 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 DCST2Q5T1A1 773 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ATAD3CQ5T2N8 411 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GARNL3Q5VVW2 1013 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 OLIG3Q7RTU3 272 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TPRA1Q86W33 373 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CACUL1Q86Y37 369 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 KCT2Q8NC54 265 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 C19orf18Q8NEA5 215 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ATP6V1C2Q8NEY4 427 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 NEIL3Q8TAT5 605 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ENKURQ8TC29 256 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 HOXB13Q92826 284 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FRMD6Q96NE9 622 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ZFYVE21Q9BQ24 234 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MACROD1Q9BQ69 325 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ZNF649Q9BS31 505 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PLA2G2FQ9BZM2 168 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 RNF121Q9H920 327 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CTPS2Q9NRF8 586 aa9.32□□□□□ -0.92
TNFRSF11B-201ENST00000297350 DOCK8Q8NF50 2099 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SNRNP200O75643 2136 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 BLACEA4D250 179 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CDHR4A6H8M9 788 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 BTN3A3O00478 584 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GABRPO00591 440 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FCMRO60667 390 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GSTT2P0CG29 244 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GSTT2BP0CG30 244 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 LAMP2P13473 410 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 UGT2B7P16662 529 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 EVX1P49640 407 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TIGD3Q6B0B8 471 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FIGLAQ6QHK4 219 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MARCH9Q86YJ5 346 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FAM20CQ8IXL6 584 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TMEM255BQ8WV15 326 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TMEM239Q8WW34 195 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 OR1E3Q8WZA6 343 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MRPL38Q96DV4 380 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SECISBP2Q96T21 854 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ATF6BQ99941 703 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 NKX2-4Q9H2Z4 354 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 OR52D1Q9H346 318 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PPP1R3EQ9H7J1 279 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TIGARQ9NQ88 270 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CMC2Q9NRP2 79 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TOR4AQ9NXH8 423 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SIDT1Q9NXL6 827 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 BABAM2Q9NXR7 383 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 HAO2Q9NYQ3 351 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ZNF624Q9P2J8 865 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 POU2F3Q9UKI9 436 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CENPXA8MT69 81 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 C2orf74A8MZ97 194 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 BHLHE40O14503 412 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 FRS3O43559 492 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GPR75O95800 540 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 STATHP02808 62 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 THY1P04216 161 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SLC2A2P11168 524 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MAGP20916 626 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MYL9P24844 172 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PBX2P40425 430 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MAP3K8P41279 467 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MAP2K3P46734 347 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 MAP4K2Q12851 820 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SF3A2Q15428 464 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TAB1Q15750 504 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TMEM196Q5HYL7 178 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PAMR1Q6UXH9 720 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 RNF44Q7L0R7 432 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 GRAMD2AQ8IUY3 354 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 CACTIN-AS1Q8N1I8 211 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 COX18Q8N8Q8 333 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 DUSP18Q8NEJ0 188 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 ZG16BQ96DA0 208 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 SAMD8Q96LT4 415 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 TM9SF2Q99805 663 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 KXD1Q9BQD3 176 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 PRSS27Q9BQR3 290 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 HINT3Q9NQE9 182 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 POT1Q9NUX5 634 aa9.31□□□□□ -0.92
TNFRSF11B-201ENST00000297350 RBFOX1Q9NWB1 397 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms