RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FGD3Q5JSP0 725 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 ZNF385CQ66K41 422 aaPredicted RBP14.4□□□□□ -0.1
LSM6-201ENST00000296581 B3GNT8Q7Z7M8 397 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 ZAR1Q86SH2 424 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 PPP1R3BQ86XI6 285 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 FBLIM1Q8WUP2 373 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 ITPAQ9BY32 194 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 Q9N2J8 555 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
LSM6-201ENST00000296581 PEX12O00623 359 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 FRS3O43559 492 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 DYRK3O43781 588 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 DDAH2O95865 285 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 IGKV1D-16P01601 117 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 IGKV3-11P04433 115 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 INHBBP09529 407 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 CYP4B1P13584 511 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 RGS8P57771 180 aaPredicted RBP14.39□□□□□ -0.11
LSM6-201ENST00000296581 ISL1P61371 349 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 IL11RAQ14626 422 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSM6-201ENST00000296581 NKAIN1Q4KMZ8 207 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 LAPTM4BQ86VI4 370 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 PARP8Q8N3A8 854 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 ZSCAN1Q8NBB4 408 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 AQP11Q8NBQ7 271 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 OR4N2Q8NGD1 307 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 SLC7A13Q8TCU3 470 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 DCUN1D5Q9BTE7 237 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 PALMDQ9NP74 551 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 MKL2Q9ULH7 1088 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 HSPE1-MOB4S4R3N1 261 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 RALGAPA1Q6GYQ0 2036 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 CLDN24A6NM45 220 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 ADAP00813 363 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 EPHA2P29317 976 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 CSTF2P33240 577 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSM6-201ENST00000296581 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
LSM6-201ENST00000296581 RAPSNQ13702 412 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 NSDHLQ15738 373 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 RGS21Q2M5E4 152 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 BMPERQ8N8U9 685 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 SETD9Q8NE22 299 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 STT3BQ8TCJ2 826 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 RHBDD1Q8TEB9 315 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 ZNF721Q8TF20 911 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 DIO2Q92813 273 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 SLC46A1Q96NT5 459 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 ING2Q9H160 280 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 ZNF556Q9HAH1 456 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 APMAPQ9HDC9 416 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 C14orf105Q9NVL8 296 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 FTSJ1Q9UET6 329 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 CLCA3PQ9Y6N3 262 aa14.39□□□□□ -0.11
LSM6-201ENST00000296581 NPIPA5A0A0B4J1W7 369 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 CDHR4A6H8M9 788 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 A8MUA0 341 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 NPIPA7E9PJI5 369 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 AGRPO00253 132 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 GASTP01350 101 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 NPIPA8P0DM63 369 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ZNF136P52737 540 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 DCDP81605 110 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 CD47Q08722 323 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 FLYWCH1Q4VC44 716 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 PRSS58Q8IYP2 241 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 LINC00471Q8N535 108 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ZNF321PQ8N8H1 164 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 AGBL5Q8NDL9 886 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 OR14A16Q8NHC5 309 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 TBC1D15Q8TC07 691 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 SLC2A12Q8TD20 617 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ATOH1Q92858 354 aaPredicted RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 HRASLS5Q96KN8 279 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 G6PC3Q9BUM1 346 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 EVA1AQ9H8M9 152 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 MGAT4BQ9UQ53 548 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 CFL2Q9Y281 166 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 PCDHGA10Q9Y5H3 936 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 GMPPBQ9Y5P6 360 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 EFCAB7A8K855 629 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 NPIPB9F8W1W9 429 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 AP3D1O14617 1153 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ZGLP1P0C6A0 271 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 CCNYL3P0C7X3 344 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 NUBP1P53384 320 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 TAS2R41P59536 307 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 RPP38P78345 283 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 CTU2Q2VPK5 515 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 MRPL2Q5T653 305 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 PODNL1Q6PEZ8 512 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 HDAC2Q92769 488 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 DAZLQ92904 295 aaKnown RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 ISOC1Q96CN7 298 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ART5Q96L15 291 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 MCHR1Q99705 422 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 PRR14Q9BWN1 585 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ENOPH1Q9UHY7 261 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms