RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SMNDC1O75940 238 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTX3-201ENST00000295927 OR5F1O95221 314 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 THY1P04216 161 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 TSPAN7P41732 249 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 GPR143P51810 404 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 PSMD4P55036 377 aaKnown RBP21.09■□□□□ 0.97
PTX3-201ENST00000295927 APOFQ13790 326 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 Q6ZPB1 254 aaPredicted RBP21.09■□□□□ 0.97
PTX3-201ENST00000295927 LINC00471Q8N535 108 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 SETD9Q8NE22 299 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 SLC38A4Q969I6 547 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 SLC41A3Q96GZ6 507 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 HRASLS5Q96KN8 279 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 MRPS26Q9BYN8 205 aaKnown RBP21.09■□□□□ 0.97
PTX3-201ENST00000295927 ANKRD19PQ9H560 264 aa21.09■□□□□ 0.97
PTX3-201ENST00000295927 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.09■□□□□ 0.97
PTX3-201ENST00000295927 AKAP7Q9P0M2 348 aaPredicted RBP21.09■□□□□ 0.97
PTX3-201ENST00000295927 A0A087WUU8 490 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 ITIH1P19827 911 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 SLC5A2P31639 672 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 UGT2B15P54855 530 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 DCAF7P61962 342 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 LSM11P83369 360 aaKnown RBP eCLIP21.08■□□□□ 0.97
PTX3-201ENST00000295927 IL5RAQ01344 420 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 FGFBP1Q14512 234 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 GDF7Q7Z4P5 450 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 AMER2Q8N7J2 671 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 OR4C3Q8NH37 302 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 APOL4Q9BPW4 351 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 DGCR6LQ9BY27 220 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 YTHDF1Q9BYJ9 559 aaKnown RBP21.08■□□□□ 0.97
PTX3-201ENST00000295927 ULBP3Q9BZM4 244 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 UCK2Q9BZX2 261 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 WWTR1Q9GZV5 400 aa21.08■□□□□ 0.97
PTX3-201ENST00000295927 OR6C76A6NM76 312 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 IL33O95760 270 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 KLK3P07288 261 aaPredicted RBP21.08■□□□□ 0.96
PTX3-201ENST00000295927 ATP6V1B1P15313 513 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 HTR2AP28223 471 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 INSM1Q01101 510 aaPredicted RBP21.08■□□□□ 0.96
PTX3-201ENST00000295927 TARDBPQ13148 414 aaKnown RBP eCLIP21.08■□□□□ 0.96
PTX3-201ENST00000295927 HLA-DQA1Q5Y7H0 255 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 FAM199XQ6PEV8 388 aaPredicted RBP21.08■□□□□ 0.96
PTX3-201ENST00000295927 SLC29A4Q7RTT9 530 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 GRAMD2AQ8IUY3 354 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 FBLIM1Q8WUP2 373 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 LRFN5Q96NI6 719 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 CRB3Q9BUF7 120 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 NRSN2Q9GZP1 204 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 EVA1AQ9H8M9 152 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 HSPE1-MOB4S4R3N1 261 aa21.08■□□□□ 0.96
PTX3-201ENST00000295927 TRIM64A6NGJ6 449 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 C4orf47A7E2U8 309 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 RFPL3O75679 317 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 CLPTM1O96005 669 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 CDH15P55291 814 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 E2F1Q01094 437 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 ZER1Q7Z7L7 766 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 CCDC71Q8IV32 467 aaPredicted RBP21.07■□□□□ 0.96
PTX3-201ENST00000295927 NKAIN4Q8IVV8 208 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 CDC6Q99741 560 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 POLR2J2Q9GZM3 115 aaKnown RBP21.07■□□□□ 0.96
PTX3-201ENST00000295927 POLR2J3Q9H1A7 115 aaKnown RBP21.07■□□□□ 0.96
PTX3-201ENST00000295927 DNAJB12Q9NXW2 375 aaKnown RBP21.07■□□□□ 0.96
PTX3-201ENST00000295927 ENOPH1Q9UHY7 261 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 LOXL2Q9Y4K0 774 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 PCDHGA6Q9Y5G7 932 aa21.07■□□□□ 0.96
PTX3-201ENST00000295927 SAGE2PA6NJ88 616 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 FMO6PO60774 539 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 NTN1O95631 604 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 MMP11P24347 488 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ILKQ13418 452 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 OR1Q1Q15612 314 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 C6orf141Q5SZD1 244 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 LAIR2Q6ISS4 152 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 NFAM1Q8NET5 270 aaPredicted RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 HDAC2Q92769 488 aaKnown RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 MR1Q95460 341 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 STRADBQ9C0K7 418 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 WDR54Q9H977 334 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 REV1Q9UBZ9 1251 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 TESQ9UGI8 421 aaKnown RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 GPN3Q9UHW5 284 aaPredicted RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 SLC7A7Q9UM01 511 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 CDC14CA4D256 554 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 GGT2P36268 569 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ETV5P41161 510 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 GSSP48637 474 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 NR0B1P51843 470 aaKnown RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 CLDN6P56747 220 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ESRRGP62508 458 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 CDK5R2Q13319 367 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ZSWIM7Q19AV6 140 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 C1orf94Q6P1W5 598 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 PRR22Q8IZ63 422 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 NLGN4XQ8N0W4 816 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 B3GNT7Q8NFL0 401 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 CNIH3Q8TBE1 160 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ARSGQ96EG1 525 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 ADNPQ9H2P0 1102 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms