RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 PAPLNO95428 1278 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 FABP5Q01469 135 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 EIF4HQ15056 248 aaKnown RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF77Q15935 545 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 FAM27D1Q5T7N8 215 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 MLIPQ5VWP3 458 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 AMZ2Q86W34 360 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 NANOGP1Q8N7R0 232 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 LRRC20Q8TCA0 184 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 TOX2Q96NM4 488 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 DYRK4Q9NR20 520 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 SSR3Q9UNL2 185 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 NPIPA5A0A0B4J1W7 369 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 CENPVL1A0A0U1RR11 272 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 NPIPA7E9PJI5 369 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ERI3O43414 337 aaKnown RBP12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 CSF3P09919 207 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 NPIPA8P0DM63 369 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 PEPDP12955 493 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 CELP19835 753 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 GIPRP48546 466 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 FNTBP49356 437 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 PSPHP78330 225 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 C9orf64Q5T6V5 341 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 MTFR2Q6P444 385 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 PAPD4Q6PIY7 484 aaKnown RBP12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 UBQLNLQ8IYU4 475 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 TMEM145Q8NBT3 493 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 NEURL3Q96EH8 262 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 RNFT2Q96EX2 444 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF354BQ96LW1 612 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 C12orf66Q96MD2 445 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ASB16Q96NS5 453 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 TMEM246Q9BRR3 403 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 MS4A8Q9BY19 250 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 NDRG2Q9UN36 371 aaKnown RBP12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 PLXNA2O75051 1894 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 DSPPQ9NZW4 1301 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ABHD14A-ACY1A0A1B0GW23 586 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ADH5P11766 374 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 CERS1P27544 350 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 ZFP69Q49AA0 526 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 POF1BQ8WVV4 589 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 BBS4Q96RK4 519 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 SRRQ9GZT4 340 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 PLEKHB1Q9UF11 243 aaPredicted RBP12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 MAU2Q9Y6X3 613 aa12.42□□□□□ -0.42
KCNIP3-201ENST00000295225 A0A087WUU8 490 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 TBC1D3BA6NDS4 549 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 PSKH1P11801 424 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 GNSP15586 552 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SRSF5Q13243 272 aaKnown RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ILKQ13418 452 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 GPR50Q13585 617 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 LRRC32Q14392 662 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF234Q14588 700 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 PDZK1Q5T2W1 519 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 OR9A2Q8NGT5 310 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SLC35G5Q96KT7 338 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SPATA9Q9BWV2 254 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 TMEM74BQ9NUR3 256 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 KCND3Q9UK17 655 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 STUB1Q9UNE7 303 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 TSPAN4O14817 238 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 NDUFS4O43181 175 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 DHFRP00374 187 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ADAP00813 363 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 F8A1P23610 371 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 MC3RP41968 323 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 KIR2DL3P43628 341 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 RGS19P49795 217 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 CTBP2P56545 445 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 HYAL2Q12891 473 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 RD3Q7Z3Z2 195 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 KRT78Q8N1N4 520 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF557Q8N988 423 aaPredicted RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 TMIEQ8NEW7 156 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 KATNB1Q9BVA0 655 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SAP130Q9H0E3 1048 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SEMA4GQ9NTN9 838 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 INSL6Q9Y581 213 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 LOC102723532A0A0G2JNH3 316 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 CASKO14936 926 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms