RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PHPT1Q9NRX4 125 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 KNTC1P50748 2209 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 ASCC3Q8N3C0 2202 aaKnown RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 LRRC72A6NJI9 287 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM229AB2RXF0 380 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 RPP14O95059 124 aaKnown RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 MT-ND5P03915 603 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TOR2AQ5JU69 321 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 GALNT11Q8NCW6 608 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 SLX1AQ9BQ83 275 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 CCDC3Q9BQI4 270 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 NARFLQ9H6Q4 476 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM5Q9Y2B1 443 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TANC1Q9C0D5 1861 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 GTPBP1O00178 669 aaKnown RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 DVL2O14641 736 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 CEBPBP17676 345 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 BLVRAP53004 296 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 MAZP56270 477 aaKnown RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 ENTPD8Q5MY95 495 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 OR5W2Q8NH69 310 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 C1orf216Q8TAB5 229 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM255BQ8WV15 326 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 ATF6BQ99941 703 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 TRDV1A0A1B0GX56 115 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 ABLIM3O94929 683 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 HNRNPA1P09651 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 LIMS3P0CW19 117 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 LIMS4P0CW20 117 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 PEPDP12955 493 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-201ENST00000286835 CCR4P51679 360 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 UBXN2BQ14CS0 331 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 NDUFAF6Q330K2 333 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 FRRS1Q6ZNA5 592 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 CAMKMTQ7Z624 323 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 WFIKKN2Q8TEU8 576 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 SMARCD2Q92925 531 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 PIGUQ9H490 435 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 A4GALTQ9NPC4 353 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 SEMA4GQ9NTN9 838 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 OR1A2Q9Y585 309 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 BRWD1Q9NSI6 2320 aa12.55□□□□□ -0.4
SCAF4-201ENST00000286835 AGAP14A8MT82 685 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 L7N2F9 121 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 PAK4O96013 591 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CHRM4P08173 479 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 C4BPBP20851 252 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 NT5EP21589 574 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CERS1P27544 350 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CRYZQ08257 329 aaKnown RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 TP53I3Q53FA7 332 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GTPBP2Q9BX10 602 aaKnown RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 METTL17Q9H7H0 456 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GNG8Q9UK08 70 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CHST2Q9Y4C5 530 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 PTPRDP23468 1912 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 FXYD6-FXYD2A0A087WZ82 144 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 A0A1W2PRQ8 180 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 SLC22A5O76082 557 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CLDN20P56880 219 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 OC90Q02509 493 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LTB4RQ15722 352 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 HYAL4Q2M3T9 481 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 C18orf63Q68DL7 685 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LRRTM4Q86VH4 590 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 KLHDC8AQ8IYD2 350 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GOT1L1Q8NHS2 421 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF514Q96K75 400 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 COQ10AQ96MF6 247 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 BABAM2Q9NXR7 383 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LSM2Q9Y333 95 aaKnown RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 KCNE3Q9Y6H6 103 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 SCN3AQ9NY46 2000 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 SLC9B1P1A6NJY1 282 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GMFGO60234 142 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 FZD7O75084 574 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 TPBGQ13641 420 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 HES5Q5TA89 166 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 RANBP3LQ86VV4 465 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-201ENST00000286835 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms