RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PAQR8Q8TEZ7 354 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 FAM84BQ96KN1 310 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 LMLNQ96KR4 655 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DUX5Q96PT3 197 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PRMT1Q99873 361 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 DUSP26Q9BV47 211 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MRPL13Q9BYD1 178 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 KLC2Q9H0B6 622 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ZCCHC4Q9H5U6 513 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MTHFD2LQ9H903 347 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 ADAP2Q9NPF8 381 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 FGFR1OP2Q9NVK5 253 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SYBUQ9NX95 663 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 UXTQ9UBK9 157 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 DHRS7Q9Y394 339 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MAST2Q6P0Q8 1798 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CABIN1Q9Y6J0 2220 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 USP42Q9H9J4 1324 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 TARM1B6A8C7 271 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 H7C0C1 242 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TLX3O43711 291 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 CALUO43852 315 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 ATP6AP2O75787 350 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CLPXO76031 633 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SNAP29O95721 258 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PGK1P00558 417 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ATP1A1P05023 1023 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 CYP11B1P15538 503 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ZNF23P17027 643 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GIFP27352 417 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 DCTDP32321 178 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RFC2P35250 354 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RPS5P46782 204 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC11A1P49279 550 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SEC61BP60468 96 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 ADORA2A-AS1P86434 159 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SPOCK1Q08629 439 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RASGEF1BQ0VAM2 473 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TRIM16LQ309B1 348 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ATP1A1-AS1Q5TC04 95 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SEL1L2Q5TEA6 688 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CLEC6AQ6EIG7 209 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TRNP1Q6NT89 227 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 IL17RELQ6ZVW7 336 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 LIMS2Q7Z4I7 341 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PRUNE1Q86TP1 453 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC22A16Q86VW1 577 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SNX31Q8N9S9 440 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR11H4Q8NGC9 324 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR1J1Q8NGS3 322 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PHLDA1Q8WV24 401 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 IRGQQ8WZA9 623 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 P2RX5Q93086 422 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MCHR2Q969V1 340 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 NUS1Q96E22 293 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ZNF578Q96N58 590 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 NEURL2Q9BR09 285 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SH2D3AQ9BRG2 576 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PRELID1Q9Y255 219 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PCDHGB1Q9Y5G3 927 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 KLK4Q9Y5K2 254 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 FOCADQ5VW36 1801 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CDHR2Q9BYE9 1310 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 A0A0A6YYH2 397 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 A6NJ64 397 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RRP8O43159 456 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 HUS1O60921 280 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SERPINB2P05120 415 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RPL35AP18077 110 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 TPSB2P20231 275 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 HPCAL1P37235 193 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TPSAB1Q15661 275 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 KLHL22Q53GT1 634 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 LRRC66Q68CR7 880 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 C22orf42Q6IC83 251 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TIPARPQ7Z3E1 657 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 DCP1BQ8IZD4 617 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 LINC01465Q8N7H1 131 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ARL14EPQ8N8R7 260 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 RPLP0P6Q8NHW5 317 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 AENQ8WTP8 325 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 FAM131CQ96AQ9 280 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC38A2Q96QD8 506 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ADNPQ9H2P0 1102 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ELOVL6Q9H5J4 265 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 C5orf66Q9H5L9 145 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 APOBEC3GQ9HC16 384 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC17A6Q9P2U8 582 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MIOXQ9UGB7 285 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MAN1B1Q9UKM7 699 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 V9GYQ6 96 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GREB1LQ9C091 1923 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR6C75A6NL08 312 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 A8MX80 341 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ERVV-1B6SEH8 477 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 NPIPA7E9PJI5 369 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CCNB2O95067 398 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 H2BFMP0C1H6 154 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 NPIPA8P0DM63 369 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PRPS2P11908 318 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms