RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SYNGR4O95473 234 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 CHEK2O96017 543 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 CGAP01215 116 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 SHBGP04278 402 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 CPA3P15088 417 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 HPGDP15428 266 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 SDC1P18827 310 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 ME2P23368 584 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 PRPH2P23942 346 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 PCYT1AP49585 367 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 MANFP55145 182 aaKnown RBP11.46□□□□□ -0.57
CD44-203ENST00000278386 ACKR1Q16570 336 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 GALNTL6Q49A17 601 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 APOOLQ6UXV4 268 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 C20orf204Q6ZNR8 217 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 GGNQ86UU5 652 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 EXOC3L1Q86VI1 746 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 WDR75Q8IWA0 830 aaKnown RBP11.46□□□□□ -0.57
CD44-203ENST00000278386 C4orf33Q8N1A6 199 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 COX18Q8N8Q8 333 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 CDRT4Q8N9R6 151 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 OR6K3Q8NGY3 331 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 OR10D3Q8NH80 312 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 CEP70Q8NHQ1 597 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 OTUB1Q96FW1 271 aaPredicted RBP11.46□□□□□ -0.57
CD44-203ENST00000278386 METTL2AQ96IZ6 378 aaKnown RBP11.46□□□□□ -0.57
CD44-203ENST00000278386 Q96MF0 132 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 PIP5K1AQ99755 562 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 REEP4Q9H6H4 257 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 TMEM185BQ9H7F4 350 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 HHATLQ9HCP6 504 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 OXSMQ9NWU1 459 aa11.46□□□□□ -0.57
CD44-203ENST00000278386 A0A087WZY1 265 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 FAM171A2A8MVW0 826 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 ALG1L2C9J202 215 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 SCDO00767 359 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 TNFSF11O14788 317 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 SMAD7O15105 426 aaKnown RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 OPN1LWP04000 364 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 ALOX5P09917 674 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 ACP2P11117 423 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 TBXA2RP21731 343 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 CRHR1P34998 444 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 SLC6A8P48029 635 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 OCRLQ01968 901 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 SLC18A2Q05940 514 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 GUSBP1Q15486 140 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 YTHDF3Q7Z739 585 aaKnown RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 C10orf107Q8IVU9 208 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 DDIASQ8IXT1 998 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 LRRC75A-AS1Q8N1F1 130 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 OR2T11Q8NH01 316 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 EPS8L3Q8TE67 593 aaKnown RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 CAVIN3Q969G5 261 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 ZBTB8AQ96BR9 441 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 ZNF764Q96H86 408 aaPredicted RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 GMPPAQ96IJ6 420 aaPredicted RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 RNF145Q96MT1 663 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 PAQR5Q9NXK6 330 aaPredicted RBP11.45□□□□□ -0.58
CD44-203ENST00000278386 CCL27Q9Y4X3 112 aa11.45□□□□□ -0.58
CD44-203ENST00000278386 NUP214P35658 2090 aaPredicted RBP11.44□□□□□ -0.58
CD44-203ENST00000278386 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 A0A1W2PRB8 838 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 H7C1Q1 480 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 CXCL13O43927 109 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 KCNK2O95069 426 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 HEXAP06865 529 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 LINC00032P0C843 101 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 KRT4P19013 534 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 HPCAL1P37235 193 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 PRIM2P49643 509 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 PCLAFQ15004 111 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 KIAA0040Q15053 153 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 DUSP5Q16690 384 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.44□□□□□ -0.58
CD44-203ENST00000278386 TMEM44Q2T9K0 475 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 PLPPR5Q32ZL2 321 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 PDSS1Q5T2R2 415 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 CCNJQ5T5M9 372 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 MFSD12Q6NUT3 480 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 ZAR1Q86SH2 424 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 GTPBP8Q8N3Z3 284 aaPredicted RBP11.44□□□□□ -0.58
CD44-203ENST00000278386 SLC16A11Q8NCK7 471 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 OR6Y1Q8NGX8 325 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 OR2V1Q8NHB1 315 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 GIMAP5Q96F15 307 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 FCRL1Q96LA6 429 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 NPAS1Q99742 590 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 C12orf49Q9H741 205 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 FANCFQ9NPI8 374 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 ZCCHC3Q9NUD5 404 aaKnown RBP11.44□□□□□ -0.58
CD44-203ENST00000278386 MED17Q9NVC6 651 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 BAIAP2L1Q9UHR4 511 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 TMED5Q9Y3A6 229 aa11.44□□□□□ -0.58
CD44-203ENST00000278386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 NPIPB8E9PQR5 432 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 LSM1O15116 133 aaKnown RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 TBX19O60806 448 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms