RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 LCMT1Q9UIC8 334 aa4.17□□□□□ -1.74
CD44-202ENST00000278385 ACSL5Q9ULC5 683 aa4.17□□□□□ -1.74
CD44-202ENST00000278385 PSMD13Q9UNM6 376 aa4.17□□□□□ -1.74
CD44-202ENST00000278385 GINS2Q9Y248 185 aa4.17□□□□□ -1.74
CD44-202ENST00000278385 CSDC2Q9Y534 153 aaKnown RBP4.17□□□□□ -1.74
CD44-202ENST00000278385 PPIAL4EA0A075B759 164 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 IGKV6-21A0A0C4DH24 114 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TRBV11-1A0A0K0K1C0 115 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 VWC2LB2RUY7 222 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 E9PMD0 336 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TMEM189-UBE2V1I3L0A0 370 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SGK494L7N484 410 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 M0R296 226 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 OVOL3O00110 214 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 P2RY10O00398 339 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 FPGTO14772 594 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 RS1O15537 224 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 LDB3O75112 727 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SCGNO76038 276 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TMCC1O94876 653 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MT-ND2P03891 347 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MMP1P03956 469 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 VTNP04004 478 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 APRTP07741 180 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PPIAL4FP0DN26 164 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 GP9P14770 177 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 DARSP14868 501 aaKnown RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 NCK1P16333 377 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 IL12BP29460 328 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 CASP14P31944 242 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PTH2RP49190 550 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MMP15P51511 669 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 NDST1P52848 882 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 CYP4F2P78329 520 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 HOXA4Q00056 320 aaPredicted RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 CDK16Q00536 496 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SIGLEC14Q08ET2 396 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 NME3Q13232 169 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PMS2P3Q13401 168 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 NFATC2Q13469 925 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MFSD13AQ14CX5 517 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 HEPACAMQ14CZ8 416 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ETFDHQ16134 617 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PSG3Q16557 428 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SYPL1Q16563 259 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 KYAT1Q16773 422 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ZNF528Q3MIS6 628 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 LINC01620Q4KN68 170 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 C6orf183Q5T699 404 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 HIST2H2AA3Q6FI13 130 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 OR2A2Q6IF42 318 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 LCN10Q6JVE6 187 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ZNF534Q76KX8 674 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SLC26A9Q7LBE3 791 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 CHSY1Q86X52 802 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ADHFE1Q8IWW8 467 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD44-202ENST00000278385 RYBPQ8N488 228 aaPredicted RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 LINC01465Q8N7H1 131 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MAB21L3Q8N8X9 362 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SNX31Q8N9S9 440 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 COLGALT1Q8NBJ5 622 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 FBXL13Q8NEE6 735 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 OR52N4Q8NGI2 321 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 OR51L1Q8NGJ5 315 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 OR1L4Q8NGR5 311 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TCP11Q8WWU5 503 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ING5Q8WYH8 240 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 LHX4Q969G2 390 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PPP1R14BQ96C90 147 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 IGSF21Q96ID5 467 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TGM7Q96PF1 710 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 MMS19Q96T76 1030 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SELENOSQ9BQE4 189 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 TRMT61BQ9BVS5 477 aaKnown RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 GSDMCQ9BYG8 508 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 LRMDAQ9H2I8 198 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SLA2Q9H6Q3 261 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 NARFLQ9H6Q4 476 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 UBTD1Q9HAC8 227 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 CCNB1IP1Q9NPC3 277 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 DUSP22Q9NRW4 184 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 C1RLQ9NZP8 487 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SENP1Q9P0U3 644 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PITPNC1Q9UKF7 332 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 ZNF346Q9UL40 294 aaKnown RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 ZNF490Q9ULM2 529 aaPredicted RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 NFE2L3Q9Y4A8 694 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 PPIAL4AQ9Y536 164 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 SIRT4Q9Y6E7 314 aaPredicted RBP4.16□□□□□ -1.74
CD44-202ENST00000278385 ADGRA3Q8IWK6 1321 aa4.16□□□□□ -1.74
CD44-202ENST00000278385 A0A096LPK6 155 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 A0A1W2PQ72 361 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 RAB19A4D1S5 217 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms