RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 MCATQ8IVS2 390 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 OR5W2Q8NH69 310 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 THSD1Q9NS62 852 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 B3GNT3Q9Y2A9 372 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PCDHA9Q9Y5H5 950 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 A0A0J9YY10 115 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 FBP2O00757 339 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 AHRP35869 848 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 CTBSQ01459 385 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 SERTAD2Q14140 314 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 KIAA0895LQ68EN5 471 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 LCTLQ6UWM7 567 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 TMEM184AQ6ZMB5 413 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 VRK2Q86Y07 508 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 GOLM1Q8NBJ4 401 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 CHDHQ8NE62 594 aaPredicted RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 B3GNT7Q8NFL0 401 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ABHD11Q8NFV4 315 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 TRUB1Q8WWH5 349 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 MMP28Q9H239 520 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 TREX1Q9NSU2 369 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 DCAF13Q9NV06 445 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 ZDHHC7Q9NXF8 308 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 RHBDD3Q9Y3P4 386 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ACOT7O00154 380 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 RNASET2O00584 256 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 GOSR2O14653 212 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 EPHA1P21709 976 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 AADACL4Q5VUY2 407 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 DPY19L4Q7Z388 723 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PAPD5Q8NDF8 572 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 TMIEQ8NEW7 156 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ADAMTS18Q8TE60 1221 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 DDX31Q9H8H2 851 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 ZNF160Q9HCG1 818 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 SACM1LQ9NTJ5 587 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 TMPRSS11EQ9UL52 423 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 LIPCP11150 499 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 HOXB9P17482 250 aaPredicted RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 DRD1P21728 446 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PCGF2P35227 344 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 DCST2Q5T1A1 773 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 RFLNAQ6ZTI6 216 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 DCP2Q8IU60 420 aaKnown RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 FNDC8Q8TC99 324 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ZFAND2BQ8WV99 257 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 RRNAD1Q96FB5 475 aaKnown RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 FAIMQ9NVQ4 179 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 MICAL3Q7RTP6 2002 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 J3KTA2 159 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 NPC1O15118 1278 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 OPRL1P41146 370 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 RGS6P49758 472 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 SYPL1Q16563 259 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 GSG1LQ6UXU4 331 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ACTR6Q9GZN1 396 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CD207Q9UJ71 328 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 HCFC2Q9Y5Z7 792 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 UGDHO60701 494 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CA5AP35218 305 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PPP5CP53041 499 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ACY1Q03154 408 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CTSL3PQ5NE16 218 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 HTR3DQ70Z44 454 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ADGRG5Q8IZF4 528 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ZNF775Q96BV0 537 aaPredicted RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 CDH20Q9HBT6 801 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 SULT2B1O00204 365 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ONECUT3O60422 494 aaPredicted RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 BCAS1O75363 584 aaPredicted RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 UBL4AP11441 157 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ZNF28P17035 718 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 OR1D4P47884 311 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 TRNP1Q6NT89 227 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CNIH2Q6PI25 160 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 B3GNT9Q6UX72 402 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 COMTD1Q86VU5 262 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 OR9A4Q8NGU2 314 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ARRDC2Q8TBH0 407 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 NRG4Q8WWG1 115 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 MYH3P11055 1940 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
USP53-201ENST00000274030 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 FTCDNL1E5RQL4 147 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PHYHO14832 338 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PRPS1P60891 318 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CXCR4P61073 352 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 TAP2Q03519 686 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 CPZQ66K79 652 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ELP2Q6IA86 826 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 ARL14Q8N4G2 192 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 OR9K2Q8NGE7 335 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 BPIFA2Q96DR5 249 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 KLHL15Q96M94 604 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 MAP3K3Q99759 626 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PINK1Q9BXM7 581 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms