RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 RDH14Q9HBH5 336 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 KLK11Q9UBX7 282 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 A0A0G2JPF8 293 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 HNRNPCL3B7ZW38 293 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 PRODHO43272 600 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 OR5F1O95221 314 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 LDOC1O95751 146 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 HNRNPCL4P0DMR1 293 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 GDNFP39905 211 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 CCNJQ5T5M9 372 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 ZNF697Q5TEC3 545 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 ADAMTS14Q8WXS8 1223 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 YIPF5Q969M3 257 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 NEIL2Q969S2 332 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 MED18Q9BUE0 208 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 EQTNQ9NQ60 294 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 ABHD14A-ACY1A0A1B0GW23 586 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 NPIPB15A6NHN6 443 aaPredicted RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 FAM170BA6NMN3 283 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 COCHO43405 550 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 PRICKLE3O43900 615 aaPredicted RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 F11P03951 625 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 KLKB1P03952 638 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 RLN2P04090 185 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ADH7P40394 386 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ASMTP46597 345 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 SLC27A4Q6P1M0 643 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 AGTRAPQ6RW13 159 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 APOOLQ6UXV4 268 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 FAM26EQ8N5C1 309 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 WBP1Q96G27 269 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 FCRL1Q96LA6 429 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 TEFMQ96QE5 360 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 SH2B3Q9UQQ2 575 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 AP1M2Q9Y6Q5 423 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 CDH23Q9H251 3354 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ANKRD61A6NGH8 418 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 FAAHO00519 579 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 GYPBP06028 91 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 CBSLP0DN79 551 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ACP5P13686 325 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 PAICSP22234 425 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 CBSP35520 551 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 HMGA2P52926 109 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 HCCSP53701 268 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 B4GALNT1Q00973 533 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 SCRN3Q0VDG4 424 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 OAFQ86UD1 273 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 L3MBTL4Q8NA19 623 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 POLDIP3Q9BY77 421 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 SLC6A20Q9NP91 592 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 RANBP2P49792 3224 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 OR5K4A6NMS3 321 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 DISC1C4P0D8 188 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 STK25O00506 426 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 CXCL14O95715 111 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ARAFP10398 606 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 MAOBP27338 520 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 VEGFBP49765 207 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 FGL1Q08830 312 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 ELAVL2Q12926 359 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 SLBPQ14493 270 aaKnown RBP eCLIP12.01□□□□□ -0.49
HERC6-202ENST00000273960 OCLNQ16625 522 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 HES5Q5TA89 166 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 VASNQ6EMK4 673 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 SIRT6Q8N6T7 355 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 TMEM99Q8N816 258 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 CHTF18Q8WVB6 975 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 SLC25A28Q96A46 364 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 TSNAXQ99598 290 aaKnown RBP12.01□□□□□ -0.49
HERC6-202ENST00000273960 DPYSL5Q9BPU6 564 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 DNAH14Q0VDD8 3507 aa12.01□□□□□ -0.49
HERC6-202ENST00000273960 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
HERC6-202ENST00000273960 TRIM23P36406 574 aa12□□□□□ -0.49
HERC6-202ENST00000273960 SPAM1P38567 509 aa12□□□□□ -0.49
HERC6-202ENST00000273960 ZNF763Q0D2J5 394 aa12□□□□□ -0.49
HERC6-202ENST00000273960 ZNF155Q12901 538 aaPredicted RBP12□□□□□ -0.49
HERC6-202ENST00000273960 SYTL3Q4VX76 610 aa12□□□□□ -0.49
HERC6-202ENST00000273960 LHX8Q68G74 356 aa12□□□□□ -0.49
HERC6-202ENST00000273960 TMUB2Q71RG4 321 aa12□□□□□ -0.49
HERC6-202ENST00000273960 TMEM185AQ8NFB2 350 aa12□□□□□ -0.49
HERC6-202ENST00000273960 OR10K1Q8NGX5 313 aa12□□□□□ -0.49
HERC6-202ENST00000273960 DOK4Q8TEW6 326 aa12□□□□□ -0.49
HERC6-202ENST00000273960 MRPS24Q96EL2 167 aaKnown RBP12□□□□□ -0.49
HERC6-202ENST00000273960 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
HERC6-202ENST00000273960 CASD1Q96PB1 797 aa12□□□□□ -0.49
HERC6-202ENST00000273960 SLC22A12Q96S37 553 aa12□□□□□ -0.49
HERC6-202ENST00000273960 MTG2Q9H4K7 406 aa12□□□□□ -0.49
HERC6-202ENST00000273960 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
HERC6-202ENST00000273960 TMEM200CA6NKL6 621 aa12□□□□□ -0.49
HERC6-202ENST00000273960 TTLL8A6PVC2 850 aa12□□□□□ -0.49
HERC6-202ENST00000273960 RNF13O43567 381 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms