RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 FAM83HQ6ZRV2 1179 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 TMEM17Q86X19 198 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 TM4SF18Q96CE8 201 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 LTB4R2Q9NPC1 389 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ZNF443Q9Y2A4 671 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 ATG4BQ9Y4P1 393 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 AGBL4Q5VU57 503 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 FIP1L1Q6UN15 594 aaKnown RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ZSCAN4Q8NAM6 433 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 S100A16Q96FQ6 103 aaKnown RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 PLA2G2FQ9BZM2 168 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 KLHL31Q9H511 634 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 IER3IP1Q9Y5U9 82 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 PCP4L1A6NKN8 68 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ZNF791Q3KP31 576 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ZNF782Q6ZMW2 699 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 IGFN1Q86VF2 1251 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ITFG2Q969R8 447 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 LRRC46Q96FV0 321 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 GPR78Q96P69 363 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 SACM1LQ9NTJ5 587 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 VNN3Q9NY84 501 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 SPHK1Q9NYA1 384 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 USP22Q9UPT9 525 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 A0A1W2PPC4 97 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 FZD6O60353 706 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ARAFP10398 606 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 MAGEA12P43365 314 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 DCAF7P61962 342 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 SEC23BQ15437 767 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 CBLL1Q75N03 491 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ZNF707Q96C28 371 aaPredicted RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 SP140LQ9H930 580 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 C2orf42Q9NWW7 574 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 YY2O15391 372 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 NARSO43776 548 aaKnown RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 ENTPD1P49961 510 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 METAP1P53582 386 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 UBE2NP61088 152 aaKnown RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 ACTA2P62736 377 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ACTG2P63267 376 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 MAD2L1BPQ15013 274 aaPredicted RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 XKR5Q6UX68 686 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 RCBTB1Q8NDN9 531 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 CNOT11Q9UKZ1 510 aaKnown RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 HSPE1-MOB4S4R3N1 261 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ZNF749O43361 778 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 HLCSP50747 726 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 TMEM64Q6YI46 380 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 MAVSQ7Z434 540 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 SLC23A2Q9UGH3 650 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 GFYI3L273 518 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 J3QRK9 145 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 AREL1O15033 823 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 GPLD1P80108 840 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
NPC1-201ENST00000269228 QRSL1Q9H0R6 528 aaKnown RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 MAGED1Q9Y5V3 778 aaPredicted RBP12.85□□□□□ -0.35
NPC1-201ENST00000269228 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 PLATP00750 562 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 CD8BP10966 210 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ACOT11Q8WXI4 607 aaPredicted RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 RADILQ96JH8 1075 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 OR10A5Q9H207 317 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 CXorf36Q9H7Y0 433 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 PCDHB16Q9NRJ7 776 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 PADI1Q9ULC6 663 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ATE1O95260 518 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ADH7P40394 386 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 PRKXP51817 358 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 KCNAB1Q14722 419 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 C4orf46Q504U0 113 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 C22orf42Q6IC83 251 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms